Codes for my publication (Nature Materials 15, 1031–1036 (2016))
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Energy gradient analysis
Fractal analysis
Main simulation

#List of directories and description More detailed descriptions of codes are written at start of file

  1. Main simulation - contains code used to generate main simulation
  2. Stress-Strain - contains codes used to calculate various measurements such as the mean squared differences, van Hoves, and stress/strain trajectories
  3. Fractal analysis - contains codes used to analyze configuration space pathways for fractal studies
  4. Energy gradient analysis - contains codes used for energy gradient analysis and simulated monte carlo path lengths