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Commits on Mar 27, 2014
  1. Merge branch 'master' of https://github.com/iPlantCollaborativeOpenSo…

    Naim Matasci
    Naim Matasci committed Mar 27, 2014
    …urce/iplant-treerec
    
    Conflicts:
    	.gitignore
Commits on Apr 28, 2011
  1. minor formatting adjustments, nothing more

    Matthew Helmke
    Matthew Helmke committed Apr 28, 2011
Commits on Apr 27, 2011
  1. Edited INSTALL via GitHub

    Matthew Helmke
    Matthew Helmke committed Apr 27, 2011
  2. Edited README via GitHub

    Matthew Helmke
    Matthew Helmke committed Apr 27, 2011
Commits on Apr 13, 2011
  1. Initial commit

    Matthew Helmke
    Matthew Helmke committed Apr 13, 2011
Commits on Mar 23, 2011
Commits on Mar 17, 2011
  1. Searches can be stopped in any advanced search type.

    Juan Raygoza
    Juan Raygoza committed Mar 17, 2011
  2. Blast search can now be cancelled.

    Juan Raygoza
    Juan Raygoza committed Mar 17, 2011
Commits on Mar 16, 2011
  1. Fixed the refreshing of the search window.

    Juan Raygoza
    Juan Raygoza committed Mar 16, 2011
  2. User can cancel ongoing searches.

    Juan Raygoza
    Juan Raygoza committed Mar 16, 2011
Commits on Mar 15, 2011
  1. TR-40: Allow for sorting of results table columns.

    Juan Raygoza
    Juan Raygoza committed Mar 15, 2011
  2. Reverted 'circle' to 'triangle' in species tree decorations

    Naim Matasci
    Naim Matasci committed Mar 15, 2011
    Removed temporary bugfix for grape
Commits on Mar 14, 2011
  1. TR-1: prevent negative sequence lengths in BLAST results and only inc…

    slr71 committed Mar 14, 2011
    …lude the match with the best E value for each gene family in BLAST results.
Commits on Feb 24, 2011
Commits on Feb 22, 2011
  1. Merge branch 'master' of ssh://projects.iplantcollaborative.org/repos…

    sriram srinivasan
    sriram srinivasan committed Feb 22, 2011
    …/applications/tr-standalone
  2. fix highlight species tree duplication event

    sriram srinivasan
    sriram srinivasan committed Feb 22, 2011
  3. Don't specify the sequence type when performing a BLAST search.

    Dennis Roberts Dennis Roberts
    Dennis Roberts authored and Dennis Roberts committed Feb 22, 2011
Commits on Feb 18, 2011
  1. Remove bugfix for species = grape

    Naim Matasci
    Naim Matasci committed Feb 18, 2011
  2. Fix merge weirdness

    hariolf committed Feb 18, 2011
  3. Merge branch 'master' of ssh://projects.iplantc.org/repo/applications…

    hariolf committed Feb 18, 2011
    …/tr-standalone
    
    Conflicts:
    	src/main/java/org/iplantc/tr/demo/client/windows/WordCloudWindow.java
  4. INCUBATORS-17: use reconciliation attributes to get the speciation an…

    slr71 committed Feb 18, 2011
    …d duplication counts.
  5. merge with repo

    sriram srinivasan
    sriram srinivasan committed Feb 18, 2011
  6. refactor code. add funtionality to differentiate speciation and dupli…

    sriram srinivasan
    sriram srinivasan committed Feb 18, 2011
    …cation events in gene tree