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Deprecation warning Regular expression #61

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yannikschaelte opened this issue Nov 13, 2018 · 0 comments
Closed

Deprecation warning Regular expression #61

yannikschaelte opened this issue Nov 13, 2018 · 0 comments
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@dweindl
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enhancement New feature or request good first issue Good for newcomers

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@yannikschaelte
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should be easy to fix, is just annoying.

/.../pypesto/pypesto/optimize/optimizer.py:349: DeprecationWarning: Flags not at the start of the expression '^(?i)(ls_)'
  return re.match(r'^(?i)(ls_)', self.method)

-- Docs: https://docs.pytest.org/en/latest/warnings.html
@yannikschaelte yannikschaelte added enhancement New feature or request good first issue Good for newcomers labels Nov 13, 2018
@dweindl dweindl self-assigned this Nov 13, 2018
@dweindl dweindl mentioned this issue Nov 13, 2018
Merged
m-philipps pushed a commit that referenced this issue Jun 14, 2022
@dweindl
Refactor Problem. Remove file names, pickle DataFrames and Model dire…
a436284 
…ctly. See discussion #61
m-philipps pushed a commit that referenced this issue Jun 14, 2022
@dweindl
Merge pull request #61 from ICB-DCM/feature_problem_from_dfs
04f7fa4 
Allow creating Problem from pre-existing data frames* Allow creating Problem from pre-existing data frames

* Flake...

* Model name and sbml_file should not be mandatory

* Refactor Problem. Remove file names, pickle DataFrames and Model directly. See discussion #61

* Fix whitespace-checking issues, extend check (Closes #59)

* Make petablint more error-tolerant and prettify

* Speedup handle_missing_overrides for larger problems (229s->64s)

* Speedup handle_missing_overrides; match names a bit looser

* Doc. Fail.

* Use ctor in Problem.from_files
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