Importer for the ICGC "Data Repository" feature which imports file metadata from various external data repositories.
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.settings
dcc-repository-aws
dcc-repository-cghub
dcc-repository-client
dcc-repository-cloud
dcc-repository-collab
dcc-repository-core
dcc-repository-ega
dcc-repository-gdc
dcc-repository-index
dcc-repository-pcawg
dcc-repository-pdc
dcc-repository-resources
dcc-repository-song
dcc-repository-tcga
.gitignore
CHANGES.md
CONTRIBUTING.md
LICENSE.md
README.md
lombok.config
pom.xml

README.md

ICGC DCC - Repository

Importer for the ICGC "Data Repository" service which imports file metadata from various external data sources for Portal publication.

Build

To compile, test and package the system, execute the following from the root of the repository:

mvn

Modules

The Repository system is comprised of the following modules.

Common

This module is the shared understanding of the system

Client

This is the main entry point of the application.

Sources

These modules collect various data sources.

AWS and Collab share common code through:

Index

This module indexes the collected data sources.

Installation

For automated deployment and installation of the infrastructure and software components, please consult the dcc-cm project.

Changes

Change log for the user-facing system modules may be found in CHANGES.md.

License

Copyright and license information may be found in LICENSE.md.