This repository contains Python scripts for checking the format of prediction files for CAFA4
For more information on CAFA see: http://biofunctionprediction.org Specifically, for the CAFA rules see: https://www.biofunctionprediction.org/cafa-targets/CAFA4_rules%20_01_2020_v4.pdf
New for any prediction file:
Where "filename" is the path to the prediction file or zipped archive
This checks any type of prediction file. CAFA4 format checker will first check that the filename is correctly formatted. Based on the filename structure, the program will run cafa_go_format_checker, cafa_do_format_checker, or cafa_hpo_format_checker.
Authored by Iddo Friedberg, Tim Bergquist and Scott Zarecor. Distributed under GPLv3 license (attached)
Important: If you are participating in CAFA4, you should subscribe to the afp-cafa mailing list: https://mailman.iastate.edu/mailman/listinfo/afpcafa