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R: rename most functions for a better API, #553

Squashed commit of the following:

commit 4494e39
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Tue Oct 7 12:54:39 2014 -0400

    R: fix building by tuning the collation order of files

commit cc9884e
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Tue Oct 7 10:37:32 2014 -0400

    R: add gorder (vcount) and gsize (ecount), #698

commit f5fd820
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Fri Oct 3 00:07:47 2014 -0400

    R: nexus function have underscore instead of dot now, #709

commit 488fc13
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Thu Oct 2 23:12:26 2014 -0400

    Remove (r)evolver stuff, #702

commit 70fdd7b
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Thu Oct 2 23:07:40 2014 -0400

    R: put DRL layout options in one object, #701

commit fe6401a
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Thu Oct 2 23:00:00 2014 -0400

    R: HRG API brush up, #700

commit b212254
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Thu Oct 2 22:43:39 2014 -0400

    R: slightly better attribute api, #699

    graph_attr, vertex_attr, edge_attr, can now query and set all attributes,
    even for a subset of vertices or edges.

commit 53805b2
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Thu Oct 2 19:52:12 2014 -0400

    R: fix more renaming bugs

commit 6871dd4
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Thu Oct 2 17:20:31 2014 -0400

    R: some renaming fixes

commit 434fad1
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Thu Oct 2 17:05:36 2014 -0400

    R: more renaming, #553

commit 2053456
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Thu Oct 2 16:13:40 2014 -0400

    R: more renaming, #553

commit e36d5c4
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Wed Oct 1 23:17:13 2014 -0400

    Rename get.data.frame to data_frame, #697

commit 713eb37
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Wed Oct 1 23:13:35 2014 -0400

    Rename as.* and is.* functions, #697

commit 87b9af2
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Wed Oct 1 20:50:46 2014 -0400

    R: make arpack.unpack.complex internal #696

commit ad7a64d
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Wed Oct 1 20:47:25 2014 -0400

    R: remove edge.betweenness.community.merges, #695

commit bbb734c
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Wed Oct 1 19:39:10 2014 -0400

    R: remove community.le.to.membership, #693

    It was defunct, anyway. The same functionality will be
    eventually added to cut_at.

commit 78a6596
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Wed Oct 1 19:02:47 2014 -0400

    R: fix some renaming typos

commit df080f9
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Wed Oct 1 14:00:31 2014 -0400

    Finish renaming, #553

commit 021f252
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Wed Oct 1 12:48:49 2014 -0400

    R: rename community structure functions, #692

commit f114cb5
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Wed Oct 1 11:26:10 2014 -0400

    R: renamed more centrality related functions #691

commit b80e0cf
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Wed Oct 1 10:49:42 2014 -0400

    R: renaming some centrality related functions #691

commit 0fc9b74
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Wed Oct 1 10:02:54 2014 -0400

    R: rename remaining constructors #553 #686

commit cbd5dec
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Tue Sep 30 16:41:14 2014 -0400

    More renaming, #553

commit 2e2ec2c
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Sun Sep 28 00:44:58 2014 -0400

    More renaming, #553

commit f8d8ef5
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Sat Sep 27 16:12:38 2014 -0400

    R: rename layout functions, #688

commit a94c8f2
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Fri Sep 26 23:59:44 2014 -0400

    Renaming most constructors, #686

commit 4cbe223
Author: Gabor Csardi <csardi.gabor@gmail.com>
Date:   Fri Sep 26 15:48:24 2014 -0400

    R: graph.ring -> g_ring
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1 parent 923974d commit 0c4869a1522cdce5fa766a30ac1bcdcb54fdb35d @gaborcsardi gaborcsardi committed Oct 7, 2014
Showing 302 changed files with 5,265 additions and 19,587 deletions.
@@ -619,7 +619,8 @@
for (i in 1:100) \{
g2 <- delete.edges(g, sample(ecount(g), 2)-1)
g2 <- g2 %u%
- random.graph.game(vcount(g), 2, type="gnm")
+ \item
+ g\_nm(vcount(g), 2)
cl <- cbind(cl, betweenness(g2))
\}
cl <- as.data.frame(t(cl))
View
@@ -74,7 +74,6 @@
#include "igraph_motifs.h"
#include "igraph_operators.h"
#include "igraph_flow.h"
-#include "igraph_revolver.h"
#include "igraph_nongraph.h"
#include "igraph_cocitation.h"
#include "igraph_adjlist.h"
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