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@igvteam

igvteam

Github repository for the Integrative Genomics Viewer (IGV) team.

Pinned

  1. igv Public

    Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

    Java 519 362

  2. igv.js Public

    Embeddable genomic visualization component based on the Integrative Genomics Viewer

    JavaScript 536 190

  3. igv-webapp Public

    IGV Web App

    JavaScript 86 29

  4. igv-reports Public

    Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.

    Python 127 28

  5. Module for embedding igv.js in an IPython notebook

    JavaScript 31 6

Repositories

  • JavaScript 2 0 3 2 Updated Nov 28, 2022
  • igv Public

    Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

    Java 519 MIT 362 87 2 Updated Nov 28, 2022
  • juicebox.js Public

    HiC contact matrix visualization

    JavaScript 16 MIT 13 21 0 Updated Nov 25, 2022
  • igv.js Public

    Embeddable genomic visualization component based on the Integrative Genomics Viewer

    JavaScript 536 MIT 190 59 0 Updated Nov 25, 2022
  • spacewalk Public

    SpaceWalk is an application for displaying and interacting with super-resolution chromatin tracing data in 3D. SpaceWalk includes igv.js and juicebox.js instances for rapid and intuitive visual comparison and interaction between 3D data and 1D genomic data.

    JavaScript 7 MIT 1 2 1 Updated Nov 24, 2022
  • JavaScript 0 1 0 2 Updated Nov 24, 2022
  • igv-widgets Public

    UI widgets for igvteam applications

    JavaScript 0 2 0 0 Updated Nov 17, 2022
  • igv-webapp Public

    IGV Web App

    JavaScript 86 MIT 29 3 1 Updated Nov 5, 2022
  • swcproject Public

    SpaceWalk CLI tool to convert legacy point-cloud and ensemble files to .sw format

    JavaScript 0 0 0 0 Updated Oct 5, 2022
  • igv-reports Public

    Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.

    Python 127 MIT 28 2 0 Updated Sep 21, 2022

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