Paper: "Evolutionary Triplet Models of Structured RNA", PLoS Comp Biol 2009
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figs
figs_plos
files_plos
frames
simulations
.gitignore
Hammerhead_1.bptest
Hammerhead_1.canonical
Hammerhead_1.gpdata
Hammerhead_1.histdata
Hammerhead_1.results
Makefile
Makefile.rectest
Published.xval-bptest
Published.xval-canonical
Published.xval-gpdata
Published.xval-histdata
Published.xval-results
algorithm2e.sty
alignment.bib
alltt.sty
array.sty
bioinfo.cls
bralibaseII.results
chngpage.sty
color.sty
cover-letter-resubmission-1.pdf
cover-letter-resubmission-1.tex
cover-letter.tex
crop.cfg
crop.sty
defs.tex
dinuc.hsm
fig1.pdf
fig1.tex
fig2.pdf
fig2.tex
fig3.pdf
fig4.pdf
fig5.pdf
float.sty
flushend.sty
genres.bst
graphicx.sty
indelign-letter.bib
just-tkfst.tex
landscap.sty
latex.zip
ly1phv.fd
make-stemloc-pairhmm-training-sets.pl
mix80-pfold.eg
mix80-rev.eg
natbib.bst
natbib.sty
nuc.hsm
nullcycle.log
nullcycle.pdf
nullcycle.tex
paper.aux
paper.bbl
paper.blg
paper.log
paper.pdf
paper.tex
paper.tex.new
paper.toc
parsetree.sty
plos2009.bst
published-pfold.eg
published-rev.eg
rectest.gnuplot
response-to-reviews.txt
response-to-reviews2.txt
retired.tex
reviews.txt
rfamrectest.pl
rmgreek.sty
rnarectest.pl
s1.pdf
s1.tex
s2.pdf
s2.tex
s3.pdf
s3.tex
s4.pdf
s4.tex
stemloc.header
stemloc.pairhmm
stfloats.sty
stree-mutations-with-structures.ai
stree-mutations-with-structures.pdf
stree-mutations.eps
stree-mutations.fig
stree-mutations.history
stree-mutations.pdf
stree-with-structure.ai
stree-with-structure.pdf
stree.eps
stree.fig
stree.pdf
supplementary.aux
supplementary.bbl
supplementary.blg
supplementary.log
supplementary.pdf
supplementary.tex
supplementary.toc
supplementary_old.pdf
texshade.sty
times.sty
tkfst.stemgram
tkfst.tex
url.sty