@ilastik

ilastik

Pinned repositories

  1. ilastik

    ilastik-shell, applets, and workflows to string them together.

    Python 126 76

  2. lazyflow

    lazy parallel ondemand zero copy numpy array data flows with caching and dirty propagation

    Python 63 48

  3. volumina

    Volume Slicing and Editing

    Python 24 39

  • ilastik-build-conda

    Conda recipes for building ilastik dependencies.

    Shell 5 14 Updated Sep 18, 2018

  • nifty

    Forked from chaubold/nifty

    nifty cPP and Python

    C++ 11 MIT Updated Sep 18, 2018

  • ilastik

    ilastik-shell, applets, and workflows to string them together.

    Python 126 76 7 issues need help Updated Sep 18, 2018

  • lazyflow

    lazy parallel ondemand zero copy numpy array data flows with caching and dirty propagation

    Python 63 48 Updated Sep 17, 2018

  • volumina

    Volume Slicing and Editing

    Python 24 39 Updated Sep 17, 2018

  • ilastik.github.io

    CSS 2 9 Updated Sep 13, 2018

  • hdf5-feedstock

    Forked from conda-forge/hdf5-feedstock

    A conda-smithy repository for hdf5.

    Fortran 29 BSD-3-Clause Updated Sep 12, 2018

  • ilastik-publish-packages

    Scripts to update our published conda packages when our recipes have changed.

    Python 2 Updated Aug 30, 2018

  • fastfilters

    Forked from svenpeter42/fastfilters

    fast gaussian and derivative convolutional filters

    C++ 9 MIT Updated Aug 30, 2018

  • numpy-allocation-tracking

    Allocation tracking utility from the numpy source repo (which isn't installed by default), plus an extra module with some decorators.

    Python 2 1 Updated Aug 29, 2018

  • ilastiktools

    Forked from DerThorsten/ilastiktools

    tools for carving

    C++ 3 Updated Aug 29, 2018

  • ilastik-feature-selection

    Select filter features with mutual-information-based methods

    Python 6 6 MIT Updated Aug 28, 2018

  • ilastikrag

    Forked from stuarteberg/ilastikrag

    ND Region Adjacency Graph with edge feature algorithms

    Jupyter Notebook 2 Updated Aug 27, 2018

  • ilastik-meta

    Small repo for tracking compatible versions of the ilastik subprojects via git submodules.

    4 Updated Aug 21, 2018

  • multiHypothesesTracking

    Forked from chaubold/multiHypothesesTracking
    C++ 7 MIT Updated Aug 20, 2018

  • dpct

    Forked from chaubold/dpct

    Dynamic Programming Cell Tracking Solver

    C++ 3 MIT Updated Aug 20, 2018

  • hytra

    Forked from chaubold/hytra

    Python module for multi HYpotheses TRAcking

    Python 6 MIT Updated Aug 20, 2018

  • wsdt

    watershed on distance transform

    Python 2 1 Updated Aug 17, 2018

  • marching_cubes

    Standalone marching cubes implementation and Python bindings

    C++ 13 2 BSD-3-Clause Updated Aug 17, 2018

  • azure-batch-ilastik

    Forked from lmiroslaw/azure-batch-ilastik

    Running Ilastik on Azure Batch

    Python 3 Updated Aug 13, 2018

  • libitk-feedstock

    Forked from conda-forge/libitk-feedstock

    A conda-smithy repository for itk.

    Shell 8 BSD-3-Clause Updated Jun 18, 2018

  • ilastik4ij

    ImageJ plugins to run ilastik workflows

    Java 1 5 MIT Updated Jun 13, 2018

  • servicehub

    Forked from HumanBrainProject/servicehub
    Python 1 Apache-2.0 Updated May 17, 2018

  • nature_methods_multicut_pipeline

    connectomics neuron-segmentation
    Python 6 3 Updated Mar 2, 2018

  • eventcapture

    Forked from stuarteberg/eventcapture

    A library for monitoring application-wide events in pyqt and playing them back for testing purposes.

    Python 4 Updated Jan 25, 2018

  • hdf5

    Forked from live-clones/hdf5
    C 33 Updated Dec 21, 2017

  • org.ilastik.bdvsource

    Java Updated Dec 9, 2017

  • z5

    Forked from constantinpape/z5

    Lighweight C++ and Python interface for datasets in zarr and N5 format

    C++ 7 MIT Updated Dec 9, 2017

  • ilastik4knime

    Java Updated Sep 28, 2017

  • MaMutConverter

    Forked from Beinabih/MaMutConverter

    hdf5 to xml

    Python 4 Updated Sep 11, 2017
    • 22

    People
    @akreshuk @buotex @burcin @burgerdev @chaubold @constantinpape @cstraehl @czhci @FredHamprecht @FynnBe @hanslovsky @jakirkham @kemaleren @martinsch @nasimrahaman @njase