ilastik

ilastik-shell, applets, and workflows to string them together.

Volume Slicing and Editing

watershed on distance transform

Conda recipes for building ilastik dependencies.

Scripts to update our published conda packages when our recipes have changed.

Standalone marching cubes implementation and Python bindings

Allocation tracking utility from the numpy source repo (which isn't installed by default), plus an extra module with some decorators.

Select filter features with mutual-information-based methods

lazy parallel ondemand zero copy numpy array data flows with caching and dirty propagation

Small repo for tracking compatible versions of the ilastik subprojects via git submodules.

ImageJ plugins to run ilastik workflows