Pinned repositories

  1. ilastik

    ilastik-shell, applets, and workflows to string them together.

    Python 126 76

  2. lazyflow

    lazy parallel ondemand zero copy numpy array data flows with caching and dirty propagation

    Python 63 48

  3. volumina

    Volume Slicing and Editing

    Python 24 39

  • Conda recipes for building ilastik dependencies.

    Shell 5 14 Updated Sep 18, 2018
  • nifty

    Forked from chaubold/nifty

    nifty cPP and Python

    C++ 11 MIT Updated Sep 18, 2018
  • ilastik-shell, applets, and workflows to string them together.

    Python 126 76 7 issues need help Updated Sep 18, 2018
  • lazy parallel ondemand zero copy numpy array data flows with caching and dirty propagation

    Python 63 48 Updated Sep 17, 2018
  • Volume Slicing and Editing

    Python 24 39 Updated Sep 17, 2018
  • CSS 2 9 Updated Sep 13, 2018
  • A conda-smithy repository for hdf5.

    Fortran 29 BSD-3-Clause Updated Sep 12, 2018
  • Scripts to update our published conda packages when our recipes have changed.

    Python 2 Updated Aug 30, 2018
  • fast gaussian and derivative convolutional filters

    C++ 9 MIT Updated Aug 30, 2018
  • Allocation tracking utility from the numpy source repo (which isn't installed by default), plus an extra module with some decorators.

    Python 2 1 Updated Aug 29, 2018
  • tools for carving

    C++ 3 Updated Aug 29, 2018
  • Select filter features with mutual-information-based methods

    Python 6 6 MIT Updated Aug 28, 2018
  • ND Region Adjacency Graph with edge feature algorithms

    Jupyter Notebook 2 Updated Aug 27, 2018
  • Small repo for tracking compatible versions of the ilastik subprojects via git submodules.

    4 Updated Aug 21, 2018
  • C++ 7 MIT Updated Aug 20, 2018
  • dpct

    Forked from chaubold/dpct

    Dynamic Programming Cell Tracking Solver

    C++ 3 MIT Updated Aug 20, 2018
  • hytra

    Forked from chaubold/hytra

    Python module for multi HYpotheses TRAcking

    Python 6 MIT Updated Aug 20, 2018
  • watershed on distance transform

    Python 2 1 Updated Aug 17, 2018
  • Standalone marching cubes implementation and Python bindings

    C++ 13 2 BSD-3-Clause Updated Aug 17, 2018
  • Running Ilastik on Azure Batch

    Python 3 Updated Aug 13, 2018
  • A conda-smithy repository for itk.

    Shell 8 BSD-3-Clause Updated Jun 18, 2018
  • ImageJ plugins to run ilastik workflows

    Java 1 5 MIT Updated Jun 13, 2018
  • Python 1 Apache-2.0 Updated May 17, 2018
  • Python 6 3 Updated Mar 2, 2018
  • A library for monitoring application-wide events in pyqt and playing them back for testing purposes.

    Python 4 Updated Jan 25, 2018
  • hdf5

    Forked from live-clones/hdf5
    C 33 Updated Dec 21, 2017
  • Java Updated Dec 9, 2017
  • z5

    Forked from constantinpape/z5

    Lighweight C++ and Python interface for datasets in zarr and N5 format

    C++ 7 MIT Updated Dec 9, 2017
  • Java Updated Sep 28, 2017
  • hdf5 to xml

    Python 4 Updated Sep 11, 2017