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README.md

ILRI HPC Environment Modules

This repo contains Environment Modules used in ILRI's research computing infrastructure.

For a full list of software, including build and usage instructions, see the list of software on ILRI's HPC wiki.

Assumptions

These modules load and unload programs installed in the /export/apps/$SOFTWARE/$SOFTWARE_VERSION directory.

For example, in our infrastructure, NCBI BLAST 2.10.0+ is installed in /export/apps/blast/2.10.0+.

Updates

There is a basic nvchecker configuration that can help check for new versions of installed applications:

$ nvchecker .nvchecker/source.ini

API keys for GitHub not included.

License

Copyright (C) 2015–2020 International Livestock Research Institute (ILRI)

The contents of this repository are free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with this program. If not, see http://www.gnu.org/licenses/.

About

Environment modules for the ILRI, Nairobi HPC cluster

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