Skip to content
Scikit-image tutorial for ImageXD 2019
Jupyter Notebook Python
Branch: master
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Type Name Latest commit message Commit time
Failed to load latest commit information.
data
solution
.gitignore
00_fundamentals_skimage.ipynb
00_fundamentals_skimage.pdf
01_2d_processing.ipynb
02_datasets_visualization.ipynb
LICENSE
README.md
check_setup.py
environment.yml
preparation.md
requirements.txt
supplementary_code.py

README.md

ImageXD 2019 - scikit-image: Introduction/3D image processing

This tutorial will introduce how to analyze three dimensional stacked and volumetric images in Python, mainly using scikit-image. Here we will learn how to:

  • pre-process data using filtering, binarization and segmentation techniques.
  • inspect, count and measure attributes of objects and regions of interest in the data.
  • visualize 3D data.

Please prepare for the tutorial by installing the pre-requisite software beforehand.

If you could not successfully set up an environment, you may also access the material via MyBinder:

Binder

For more info:

You can’t perform that action at this time.