itcviewer

A data viewer for the Innate T Cell project.

🚀 Explore the data

https://immunogenomics.io/itc

🎓 Read the paper

Lymphocyte innateness defined by transcriptional states reflects a balance between proliferation and effector functions

Maria Gutierrez-Arcelus, Nikola Teslovich, Alex R. Mola, Rafael B. Polidoro, Aparna Nathan, Hyun Kim, Susan Hannes, Kamil Slowikowski, Gerald F. M. Watts, Ilya Korsunsky, Michael B. Brenner, Soumya Raychaudhuri & Patrick J. Brennan.

Nature Communications 2019. https://doi.org/10.1038/s41467-019-08604-4

💾 Get the data

The data presented here comes from the laboratories of:

• Dr. Patrick J. Brennan
• Dr. Soumya Raychaudhuri
• Dr. Michael B. Brenner

Download the data from NCBI GEO:

• GSE124731

Get the code

Get the code for the analysis in the paper:

• https://github.com/immunogenomics/itc

Get the code for the data viewer:

• https://github.com/immunogenomics/itcviewer