Highlights:
- Model updates since previous release (v2.2.0):
- Updated Assay component to include latest Virtual Biorepository model
- Updated Study component and added new Dataset and DatasetManifest components to support new Study/Dataset pages in Data Hub
- Inclusion of over 25 new slots
- 5 new enumerations: EnumClinicalDataSourceType, EnumDataCategory, EnumGuidType, EnumParticipantLifespanStage, EnumResearchDomain
- Validation: Streamlines data cleaning and validation via the command line (CLI), allowing users to specify the data type and file path. The CLI reads, cleans, and validates data using LinkML-defined models for robust validation. For more details, use validate-data --help.
- Error Reporting and Logging: Summarizes errors by type for quick corrective action and saves validation results for traceability and analysis.
What's Changed
- add hasStudy to Condition by @lopierra in #118
- re-generating jsonld and csv from yaml (no changes to model) by @lopierra in #122
- update hakonarson study name; add containerAvailability by @lopierra in #153
- 2024 01 15 updates by @lopierra in #154
- Add new slots and enums to Study; add new class Dataset by @lopierra in #163
- Last updates before major release by @lopierra in #181
- gh pages uml fix by @madanucd in #183
Full Changelog: v2.2.0...v3.0.0_rc1
Contributors
lopierra and madanucd