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+ addition of genome center linux image alterations

  - specification of a __GENOME__ flag in the Makefile
  - addition of a specialized endian.h to use with the __GENOME__
    flag if defined
  • Loading branch information...
commit 14da3c31289ca39b571615a565c97955b1759550 1 parent c3cc139
@indraniel authored
Showing with 97 additions and 1 deletion.
  1. +1 −1  Makefile
  2. +96 −0 endian.h
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2  Makefile
@@ -7,7 +7,7 @@ main.o: main.c sff.h
gcc -g -I. -c main.c
sff.o: sff.c sff.h
- gcc -g -I. -c sff.c
+ gcc -D__GENOME__ -g -I. -c sff.c
clean:
rm sff2fastq main.o sff.o
View
96 endian.h
@@ -0,0 +1,96 @@
+/* Copyright (C) 1992, 1996, 1997, 2000, 2008 Free Software Foundation, Inc.
+ This file is part of the GNU C Library.
+
+ The GNU C Library is free software; you can redistribute it and/or
+ modify it under the terms of the GNU Lesser General Public
+ License as published by the Free Software Foundation; either
+ version 2.1 of the License, or (at your option) any later version.
+
+ The GNU C Library is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ Lesser General Public License for more details.
+
+ You should have received a copy of the GNU Lesser General Public
+ License along with the GNU C Library; if not, write to the Free
+ Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA
+ 02111-1307 USA. */
+
+#ifndef _ENDIAN_H
+#define _ENDIAN_H 1
+
+#include <features.h>
+
+/* Definitions for byte order, according to significance of bytes,
+ from low addresses to high addresses. The value is what you get by
+ putting '4' in the most significant byte, '3' in the second most
+ significant byte, '2' in the second least significant byte, and '1'
+ in the least significant byte, and then writing down one digit for
+ each byte, starting with the byte at the lowest address at the left,
+ and proceeding to the byte with the highest address at the right. */
+
+#define __LITTLE_ENDIAN 1234
+#define __BIG_ENDIAN 4321
+#define __PDP_ENDIAN 3412
+
+/* This file defines `__BYTE_ORDER' for the particular machine. */
+#include <bits/endian.h>
+
+/* Some machines may need to use a different endianness for floating point
+ values. */
+#ifndef __FLOAT_WORD_ORDER
+# define __FLOAT_WORD_ORDER __BYTE_ORDER
+#endif
+
+#ifdef __USE_BSD
+# define LITTLE_ENDIAN __LITTLE_ENDIAN
+# define BIG_ENDIAN __BIG_ENDIAN
+# define PDP_ENDIAN __PDP_ENDIAN
+# define BYTE_ORDER __BYTE_ORDER
+#endif
+
+#if __BYTE_ORDER == __LITTLE_ENDIAN
+# define __LONG_LONG_PAIR(HI, LO) LO, HI
+#elif __BYTE_ORDER == __BIG_ENDIAN
+# define __LONG_LONG_PAIR(HI, LO) HI, LO
+#endif
+
+
+#ifdef __USE_BSD
+/* Conversion interfaces. */
+# include <byteswap.h>
+
+# if __BYTE_ORDER == __LITTLE_ENDIAN
+# define htobe16(x) __bswap_16 (x)
+# define htole16(x) (x)
+# define be16toh(x) __bswap_16 (x)
+# define le16toh(x) (x)
+
+# define htobe32(x) __bswap_32 (x)
+# define htole32(x) (x)
+# define be32toh(x) __bswap_32 (x)
+# define le32toh(x) (x)
+
+# define htobe64(x) __bswap_64 (x)
+# define htole64(x) (x)
+# define be64toh(x) __bswap_64 (x)
+# define le64toh(x) (x)
+# else
+# define htobe16(x) (x)
+# define htole16(x) __bswap_16 (x)
+# define be16toh(x) (x)
+# define le16toh(x) __bswap_16 (x)
+
+# define htobe32(x) (x)
+# define htole32(x) __bswap_32 (x)
+# define be32toh(x) (x)
+# define le32toh(x) __bswap_32 (x)
+
+# define htobe64(x) (x)
+# define htole64(x) __bswap_64 (x)
+# define be64toh(x) (x)
+# define le64toh(x) __bswap_64 (x)
+# endif
+#endif
+
+#endif /* endian.h */
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