From 1aa3340e64d1891fdf98e819ebf1911a553baece Mon Sep 17 00:00:00 2001 From: Charles Tapley Hoyt Date: Tue, 25 Jul 2023 12:27:08 -0400 Subject: [PATCH 1/2] Add `previous name` synonym type Closes #139 --- src/templates/annotation_properties.tsv | 1 + 1 file changed, 1 insertion(+) diff --git a/src/templates/annotation_properties.tsv b/src/templates/annotation_properties.tsv index 2f8ea7b..ced983f 100644 --- a/src/templates/annotation_properties.tsv +++ b/src/templates/annotation_properties.tsv @@ -8,3 +8,4 @@ OMO:0003004 owl:AnnotationProperty plural form A synonym type for describing plu OMO:0003005 owl:AnnotationProperty UK spelling synonym A synonym type for describing UK spelling variants oboInOwl:SynonymType https://orcid.org/0000-0003-4423-4370 2023-03-03 CHEBI:16189 (sulfate) has an exact synonym (sulphate), which is of the type OMO:0003005 (UK spelling synonym) https://github.com/information-artifact-ontology/ontology-metadata/issues/122 OMO:0003006 owl:AnnotationProperty misspelling A synonym type for common misspellings oboInOwl:SynonymType https://orcid.org/0000-0003-4423-4370 2023-03-03 https://github.com/information-artifact-ontology/ontology-metadata/issues/132 OMO:0003007 owl:AnnotationProperty misnomer A synonym type for misnomers, i.e., a synonym that is not technically correct but is commonly used anyway oboInOwl:SynonymType https://orcid.org/0000-0003-4423-4370 2023-03-03 https://github.com/information-artifact-ontology/ontology-metadata/issues/133 +OMO:0003008 owl:AnnotationProperty previous name A synonym type for previous names that used to be the primary label. names oboInOwl:SynonymType https://orcid.org/0000-0003-4423-4370 2023-07-25 MAPT, the gene that encodes the Tau protein, has a previous name DDPAC. Note: in this case, the name type is more specifically the gene symbol. https://github.com/information-artifact-ontology/ontology-metadata/issues/139 From 5d902b19afb7c9e73e39248ed0584e3e781545b6 Mon Sep 17 00:00:00 2001 From: Charles Tapley Hoyt Date: Thu, 27 Jul 2023 07:25:14 -0400 Subject: [PATCH 2/2] Update src/templates/annotation_properties.tsv Co-authored-by: Nico Matentzoglu --- src/templates/annotation_properties.tsv | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/src/templates/annotation_properties.tsv b/src/templates/annotation_properties.tsv index ced983f..264620b 100644 --- a/src/templates/annotation_properties.tsv +++ b/src/templates/annotation_properties.tsv @@ -8,4 +8,5 @@ OMO:0003004 owl:AnnotationProperty plural form A synonym type for describing plu OMO:0003005 owl:AnnotationProperty UK spelling synonym A synonym type for describing UK spelling variants oboInOwl:SynonymType https://orcid.org/0000-0003-4423-4370 2023-03-03 CHEBI:16189 (sulfate) has an exact synonym (sulphate), which is of the type OMO:0003005 (UK spelling synonym) https://github.com/information-artifact-ontology/ontology-metadata/issues/122 OMO:0003006 owl:AnnotationProperty misspelling A synonym type for common misspellings oboInOwl:SynonymType https://orcid.org/0000-0003-4423-4370 2023-03-03 https://github.com/information-artifact-ontology/ontology-metadata/issues/132 OMO:0003007 owl:AnnotationProperty misnomer A synonym type for misnomers, i.e., a synonym that is not technically correct but is commonly used anyway oboInOwl:SynonymType https://orcid.org/0000-0003-4423-4370 2023-03-03 https://github.com/information-artifact-ontology/ontology-metadata/issues/133 -OMO:0003008 owl:AnnotationProperty previous name A synonym type for previous names that used to be the primary label. names oboInOwl:SynonymType https://orcid.org/0000-0003-4423-4370 2023-07-25 MAPT, the gene that encodes the Tau protein, has a previous name DDPAC. Note: in this case, the name type is more specifically the gene symbol. https://github.com/information-artifact-ontology/ontology-metadata/issues/139 +OMO:0003008 owl:AnnotationProperty previous name A synonym type for names that have been used as primary labels in the past. oboInOwl:SynonymType https://orcid.org/0000-0003-4423-4370 2023-07-25 MAPT, the gene that encodes the Tau protein, has a previous name DDPAC. Note: in this case, the name type is more specifically the gene symbol. https://github.com/information-artifact-ontology/ontology-metadata/issues/139 +