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Pinned repositories
1,951 contributions in the last year
Activity overview
Contributed to
cBioPortal/cbioportal,
cBioPortal/cbioportal-frontend,
genome-nexus/genome-nexus
and 5 other
repositories
Contribution activity
September 2018
Created a pull request in cBioPortal/cbioportal that received 7 comments
For MUTATION_COUNT include only MUTATION_EXTENDED
At MSKCC there are some MUTATION_EXTENDED_UNCALLED and FUSION profiles that shouldn't be included when determining the number of mutations for a sa…
+31
−2
•
7
comments
Created an issue in cBioPortal/cbioportal that received 3 comments
multi study query not working when `global_case_list: true`
Related to:
#4502
The case list type shows up as other when using global_case_list: true which cause the multi study query the malfunction.
As repo…
3
comments
- validator should not allow MUTATION_COUNT and FRACTION_GENOME_ALTERED
- E2E tests for downloading files
- Virtual studies listed as normal studies in query selector when tree setting is non-nested
- co-expression tab: add volcano plot (on top of the current scatter plot) of spearman correlation (x-axis) vs q value (y-axis).
- MUTATION_COUNT issues with %_uncalled profile
- Document `-D` parameter configuration and make all properties in GlobalProperties configurable in the same manner
- Dev portals showing up in search results of google.com
- Cohort column for UNCALLED mutations on patient view
- A few samples possibly removed from public portal?