Data sources for FlyMine
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affy-probes
arbeitman-items-xml
bdgp-clone
bdgp-insitu
config
drosdel-gff
drosophila-homology
fly-anatomy-ontology
fly-development-ontology
fly-fish
fly-misc-cvterms
flyatlas
flybase-alleles
flybase-expression
flymine-static
flyreg
gradle/wrapper
long-oligo
miranda
redfly
rnai
.gitignore
.travis.yml
README.md
build.gradle
flymine-global_additions.xml
gradle.properties
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gradlew.bat
settings.gradle

README.md

FlyMine

Master: Build Status: master Version License Research software impact Conda

This is a repository of all the data parsers used to load Drosophila data into an InterMine instance (FlyMine). These are fly-specific data, and in addition to the core data parsers available in InterMine. See the intermine-scripts respository for the scripts we use to actually download the fly data.

Copyright and Licence

Copyright (C) 2002-2018 FlyMine

See LICENSE file for licensing information.

This product includes software developed by the Apache Software Foundation

Please cite

InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data.
Smith RN, Aleksic J, Butano D, Carr A, Contrino S, Hu F, Lyne M, Lyne R, Kalderimis A, Rutherford K, Stepan R, Sullivan J, Wakeling M, Watkins X, Micklem G.
Bioinformatics (2012) 28 (23): 3163-3165.
doi pubmed