This project develops the program FORGE. It allows to calculate gene p-values from Genome-Wide Association Data using multivariate methods. The gene-level statistics can be used for pathway or other system biology analyses (check out sister project for additional on pathway analysis with GWAS data: https://github.com/inti/GeneSetAnalysis/wiki). …
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example
gene_sets
utilities
CovMatrix.pm
GWAS_IO.pm
GWAS_STATS.pm
Pareto_Distr_Fit.pm
README.md
affy_to_rsID.tab
forge.pl
gsa.pl
meta_analysis.pl

README.md

#FORGE software suit

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DOI

This projects develops software to perform systems biology analyses for genome-wide association studies. For the latest version of the source code please visit https://github.com/inti/FORGE For documentation and example please visit https://github.com/inti/FORGE/wiki

Bugs and equiries should be sent to Inti Pedroso or Gerome Breen Gerome Breen gerome dot breen at kcl dot ac dot uk

Inti Pedroso 18 feb 2011