[bam_sort_core] merging from 20 files and 20 in-memory blocks...
[bam_sort_core] merging from 20 files and 20 in-memory blocks...
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230it [42:57,  3.45s/it]
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231it [43:00,  3.41s/it]
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232it [43:04,  3.49s/it]
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237it [43:22,  3.61s/it]
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240it [48:44, 97.19s/it]
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241it [48:47, 68.87s/it]
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242it [48:50, 49.13s/it]
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243it [48:53, 35.30s/it]
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244it [48:56, 25.61s/it]
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245it [48:59, 18.89s/it]
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246it [49:03, 14.21s/it]
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247it [49:06, 10.99s/it]
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248it [49:09,  8.67s/it]
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249it [49:13,  7.12s/it]
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250it [49:17,  6.18s/it]
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252it [49:24,  4.83s/it]
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253it [49:28,  4.51s/it]
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254it [49:31,  4.21s/it]
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255it [49:35,  4.23s/it]
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256it [49:39,  4.15s/it]
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257it [49:43,  4.06s/it]
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258it [49:47,  4.05s/it]
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259it [49:51,  4.03s/it]
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260it [49:55,  3.78s/it]
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261it [49:58,  3.80s/it]
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262it [50:02,  3.65s/it]
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263it [50:06,  3.76s/it]
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264it [50:10,  3.82s/it]
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267it [50:21,  3.77s/it]
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269it [50:29,  3.93s/it]
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270it [50:33,  3.87s/it]
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275it [50:53,  4.07s/it]
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276it [50:57,  4.11s/it]
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277it [51:02,  4.21s/it]
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278it [51:06,  4.26s/it]
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279it [51:10,  4.26s/it]
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280it [56:06, 91.60s/it]
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281it [56:09, 65.13s/it]
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282it [56:13, 46.64s/it]
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283it [56:16, 33.71s/it]
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284it [56:20, 24.66s/it]
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285it [56:24, 18.43s/it]
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286it [56:28, 14.12s/it]
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287it [56:32, 11.07s/it]
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288it [56:35,  8.88s/it]
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289it [56:39,  7.43s/it]
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290it [56:44,  6.61s/it]
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291it [56:48,  5.93s/it]
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292it [56:53,  5.40s/it]
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293it [56:57,  5.10s/it]
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294it [57:02,  4.95s/it]
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295it [57:06,  4.71s/it]
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296it [57:11,  4.79s/it]
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297it [57:15,  4.67s/it]
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298it [57:20,  4.59s/it]
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299it [57:24,  4.52s/it]
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300it [57:29,  4.57s/it]
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301it [57:33,  4.50s/it]
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302it [57:37,  4.49s/it]
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303it [57:42,  4.47s/it]
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304it [57:46,  4.29s/it]
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305it [57:50,  4.39s/it]
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306it [57:55,  4.36s/it]
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307it [57:59,  4.36s/it]
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308it [58:04,  4.52s/it]
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309it [58:08,  4.49s/it]
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310it [58:13,  4.52s/it]
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311it [58:18,  4.61s/it]
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312it [58:22,  4.63s/it]
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313it [58:27,  4.63s/it]
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314it [58:32,  4.76s/it]
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315it [58:37,  4.75s/it]
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316it [58:42,  4.82s/it]
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317it [58:47,  4.93s/it]
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318it [58:52,  4.91s/it]
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319it [58:57,  5.03s/it]
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320it [1:03:36, 87.10s/it]
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321it [1:03:40, 62.33s/it]
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322it [1:03:45, 44.94s/it]
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323it [1:03:49, 32.87s/it]
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324it [1:03:54, 24.35s/it]
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325it [1:03:58, 18.36s/it]
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326it [1:04:03, 14.23s/it]
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327it [1:04:07, 11.25s/it]
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328it [1:04:12,  9.29s/it]
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329it [1:04:16,  7.90s/it]
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330it [1:04:21,  6.93s/it]
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331it [1:04:26,  6.29s/it]
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332it [1:04:31,  5.96s/it]
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333it [1:04:36,  5.70s/it]
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334it [1:04:41,  5.52s/it]
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335it [1:04:46,  5.44s/it]
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336it [1:04:52,  5.39s/it]
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340it [1:05:13,  5.27s/it]
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341it [1:05:18,  5.26s/it]
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342it [1:05:22,  5.03s/it]
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343it [1:05:27,  5.01s/it]
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345it [1:05:37,  5.05s/it]
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347it [1:05:47,  5.09s/it]
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350it [1:06:04,  5.40s/it]
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362it [1:11:23, 42.74s/it]
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368it [1:11:56,  9.82s/it]
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369it [1:12:01,  8.52s/it]
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370it [1:12:07,  7.62s/it]
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371it [1:12:12,  6.96s/it]
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372it [1:12:18,  6.62s/it]
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374it [1:12:30,  6.16s/it]
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375it [1:12:35,  5.99s/it]
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376it [1:12:41,  5.87s/it]
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377it [1:12:46,  5.82s/it]
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378it [1:12:53,  5.92s/it]
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379it [1:12:59,  5.96s/it]
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380it [1:13:04,  5.88s/it]
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381it [1:13:10,  5.96s/it]
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382it [1:13:16,  5.72s/it]
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383it [1:13:22,  5.80s/it]
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384it [1:13:27,  5.53s/it]
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385it [1:13:32,  5.47s/it]
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386it [1:13:37,  5.51s/it]
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387it [1:13:43,  5.51s/it]
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388it [1:13:49,  5.67s/it]
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390it [1:14:02,  5.97s/it]
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391it [1:14:08,  6.17s/it]
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420it [1:20:55,  6.46s/it]
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488it [1:34:42,  9.89s/it]
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1146it [3:47:01, 15.31s/it]
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1147it [3:47:16, 15.46s/it]
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1148it [3:47:32, 15.42s/it]
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1151it [3:48:18, 15.52s/it]
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1152it [3:48:35, 15.71s/it]
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1153it [3:48:50, 15.62s/it]
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1156it [3:49:37, 15.64s/it]
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1157it [3:49:52, 15.62s/it]
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1158it [3:50:08, 15.52s/it]
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1159it [3:50:22, 15.03s/it]
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1160it [3:50:35, 14.62s/it]
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1161it [3:50:51, 14.88s/it]
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1162it [3:51:07, 15.28s/it]
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1163it [3:51:23, 15.51s/it]
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1199it [4:00:45, 15.66s/it]
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1211it [4:03:56, 15.91s/it]
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1212it [4:04:11, 15.69s/it]
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1216it [4:05:16, 16.17s/it]
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1220it [4:06:19, 15.81s/it]
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1226it [4:07:56, 16.18s/it]
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1234it [4:10:06, 16.47s/it]
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1237it [4:10:55, 16.38s/it]
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1928it [8:08:20, 25.06s/it]
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1929it [8:08:45, 25.13s/it]
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1931it [8:09:36, 25.21s/it]
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1932it [8:10:01, 25.23s/it]
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1933it [8:10:26, 25.12s/it]
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1934it [8:10:51, 25.19s/it]
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1935it [8:11:17, 25.34s/it]
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1939it [8:12:59, 25.43s/it]
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1940it [8:13:24, 25.40s/it]
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1941it [8:13:49, 25.40s/it]
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1942it [8:14:15, 25.42s/it]
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1945it [8:15:31, 25.45s/it]
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1949it [8:17:13, 25.40s/it]
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1950it [8:17:39, 25.55s/it]
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1951it [8:18:05, 25.71s/it]
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1952it [8:18:31, 25.71s/it]
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1953it [8:18:56, 25.66s/it]
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1954it [8:19:22, 25.70s/it]
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1955it [8:19:48, 25.78s/it]
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1956it [8:20:14, 25.69s/it]
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1957it [8:20:40, 25.83s/it]
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1958it [8:21:05, 25.78s/it]
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1959it [8:21:31, 25.78s/it]
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1960it [8:21:57, 25.76s/it]
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1961it [8:22:22, 25.71s/it]
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1962it [8:22:48, 25.66s/it]
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1963it [8:23:14, 25.69s/it]
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1964it [8:23:39, 25.65s/it]
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1965it [8:24:05, 25.70s/it]
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1966it [8:24:31, 25.64s/it]
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1967it [8:24:56, 25.63s/it]
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1968it [8:25:22, 25.71s/it]
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1969it [8:25:48, 25.70s/it]
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1970it [8:26:14, 25.77s/it]
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1971it [8:26:39, 25.68s/it]
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1972it [8:27:05, 25.72s/it]
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1973it [8:27:30, 25.61s/it]
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1974it [8:27:56, 25.70s/it]
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1975it [8:28:22, 25.82s/it]
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1976it [8:28:48, 25.77s/it]
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1977it [8:29:14, 25.88s/it]
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1978it [8:29:40, 25.85s/it]
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1979it [8:30:06, 25.97s/it]
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1980it [8:30:32, 26.05s/it]
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1981it [8:30:58, 25.94s/it]
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1982it [8:31:24, 25.92s/it]
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1983it [8:31:50, 25.88s/it]
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1984it [8:32:16, 25.86s/it]
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1985it [8:32:42, 25.87s/it]
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1986it [8:33:08, 25.93s/it]
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1987it [8:33:33, 25.87s/it]
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1988it [8:34:00, 25.98s/it]
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1989it [8:34:26, 26.05s/it]
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1990it [8:34:52, 25.99s/it]
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1991it [8:35:18, 26.03s/it]
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1992it [8:35:44, 26.09s/it]
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1993it [8:36:10, 26.08s/it]
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1994it [8:36:36, 26.09s/it]
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1995it [8:37:02, 25.96s/it]
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1996it [8:37:28, 25.94s/it]
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1997it [8:37:54, 26.12s/it]
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1998it [8:38:20, 26.10s/it]
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1999it [8:38:46, 26.10s/it]
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2000it [8:39:12, 26.03s/it]
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2001it [8:39:38, 26.08s/it]
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2002it [8:40:05, 26.17s/it]
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2007it [8:42:15, 26.11s/it]
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2008it [8:42:41, 26.05s/it]
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2009it [8:43:07, 26.05s/it]
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2010it [8:43:33, 26.11s/it]
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2011it [8:43:59, 26.09s/it]
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2012it [8:44:26, 26.15s/it]
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2013it [8:44:52, 26.14s/it]
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2014it [8:45:18, 26.22s/it]
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2015it [8:45:45, 26.32s/it]
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2016it [8:46:11, 26.35s/it]
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2017it [8:46:37, 26.25s/it]
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2018it [8:47:04, 26.36s/it]
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2019it [8:47:31, 26.46s/it]
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2020it [8:47:57, 26.50s/it]
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2021it [8:48:24, 26.48s/it]
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2022it [8:48:50, 26.48s/it]
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2023it [8:49:16, 26.39s/it]
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2024it [8:49:43, 26.37s/it]
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2557it [13:15:22, 29.74s/it][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 64%|██████▍   | 2558/4000 [13:15:22<8:21:25, 20.86s/it] 

2558it [13:15:22, 20.86s/it][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 64%|██████▍   | 2571/4000 [13:15:22<5:47:53, 14.61s/it][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


2571it [13:15:22, 14.61s/it][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 65%|██████▍   | 2589/4000 [13:15:22<4:00:29, 10.23s/it][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


2589it [13:15:22, 10.23s/it][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 65%|██████▌   | 2607/4000 [13:15:22<2:46:14,  7.16s/it][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

2607it [13:15:22,  7.16s/it][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 66%|██████▌   | 2625/4000 [13:15:22<1:54:54,  5.01s/it][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


2625it [13:15:22,  5.01s/it][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 66%|██████▌   | 2643/4000 [13:15:22<1:19:25,  3.51s/it][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

2643it [13:15:22,  3.51s/it][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 67%|██████▋   | 2661/4000 [13:15:23<54:53,  2.46s/it]  [E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


2662it [13:15:23,  2.46s/it][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 67%|██████▋   | 2678/4000 [13:15:23<37:58,  1.72s/it][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


2683it [13:15:23,  1.72s/it][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 67%|██████▋   | 2698/4000 [13:15:23<26:12,  1.21s/it][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

2706it [13:15:23,  1.21s/it][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 68%|██████▊   | 2722/4000 [13:15:23<18:02,  1.18it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

2726it [13:15:23,  1.18it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 69%|██████▊   | 2741/4000 [13:15:23<12:28,  1.68it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

2749it [13:15:23,  1.68it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 69%|██████▉   | 2764/4000 [13:15:23<08:36,  2.39it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

2769it [13:15:23,  2.39it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 70%|██████▉   | 2785/4000 [13:15:23<05:57,  3.40it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

2793it [13:15:23,  3.40it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 70%|███████   | 2807/4000 [13:15:23<04:07,  4.83it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


2814it [13:15:23,  4.83it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 71%|███████   | 2830/4000 [13:15:23<02:51,  6.83it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

2835it [13:15:23,  6.83it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 71%|███████▏  | 2851/4000 [13:15:23<01:59,  9.61it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

2855it [13:15:24,  9.59it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 72%|███████▏  | 2872/4000 [13:15:24<01:23, 13.44it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

2875it [13:15:24, 13.41it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 72%|███████▏  | 2892/4000 [13:15:24<00:59, 18.62it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

2895it [13:15:24, 18.61it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 73%|███████▎  | 2912/4000 [13:15:24<00:42, 25.53it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

2915it [13:15:24, 25.52it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 73%|███████▎  | 2932/4000 [13:15:24<00:30, 34.58it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

2935it [13:15:24, 34.56it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 74%|███████▍  | 2952/4000 [13:15:24<00:22, 45.90it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

2956it [13:15:24, 45.91it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 74%|███████▍  | 2972/4000 [13:15:24<00:17, 59.60it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

2976it [13:15:24, 59.62it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 75%|███████▍  | 2992/4000 [13:15:24<00:13, 75.41it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

2996it [13:15:24, 75.26it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 75%|███████▌  | 3013/4000 [13:15:24<00:10, 92.86it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

3019it [13:15:24, 93.55it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 76%|███████▌  | 3035/4000 [13:15:24<00:08, 111.69it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

3040it [13:15:24, 111.24it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 76%|███████▋  | 3056/4000 [13:15:25<00:07, 126.94it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

3061it [13:15:25, 128.71it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 77%|███████▋  | 3076/4000 [13:15:25<00:06, 140.96it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

3082it [13:15:25, 142.34it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 77%|███████▋  | 3096/4000 [13:15:25<00:05, 153.34it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

3102it [13:15:25, 154.47it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 78%|███████▊  | 3116/4000 [13:15:25<00:05, 162.76it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

3122it [13:15:25, 163.72it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 78%|███████▊  | 3137/4000 [13:15:25<00:04, 172.84it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

3142it [13:15:25, 171.59it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 79%|███████▉  | 3157/4000 [13:15:25<00:04, 175.30it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

3162it [13:15:25, 172.02it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 79%|███████▉  | 3177/4000 [13:15:25<00:04, 178.60it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

3181it [13:15:25, 175.96it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 80%|███████▉  | 3197/4000 [13:15:28<00:40, 19.83it/s] [E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3200it [13:15:28, 18.97it/s] [E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 81%|████████  | 3222/4000 [13:15:28<00:28, 27.38it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3225it [13:15:28, 26.24it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 81%|████████  | 3248/4000 [13:15:28<00:20, 37.39it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3251it [13:15:28, 35.90it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 82%|████████▏ | 3272/4000 [13:15:29<00:14, 50.06it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3275it [13:15:29, 48.17it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 82%|████████▏ | 3297/4000 [13:15:29<00:10, 65.79it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3300it [13:15:29, 63.51it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 83%|████████▎ | 3323/4000 [13:15:29<00:07, 84.63it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3326it [13:15:29, 81.50it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 84%|████████▎ | 3347/4000 [13:15:29<00:06, 104.86it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3352it [13:15:29, 102.34it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 84%|████████▍ | 3373/4000 [13:15:29<00:04, 127.23it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3378it [13:15:29, 124.63it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 85%|████████▍ | 3398/4000 [13:15:29<00:04, 148.82it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3404it [13:15:29, 147.32it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 86%|████████▌ | 3428/4000 [13:15:29<00:03, 174.51it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3434it [13:15:29, 173.10it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 86%|████████▋ | 3457/4000 [13:15:29<00:02, 196.86it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3462it [13:15:29, 194.96it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 87%|████████▋ | 3486/4000 [13:15:29<00:02, 216.72it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3491it [13:15:29, 215.41it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 88%|████████▊ | 3515/4000 [13:15:30<00:02, 228.89it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3519it [13:15:30, 227.24it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 89%|████████▊ | 3544/4000 [13:15:30<00:01, 243.13it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3548it [13:15:30, 242.03it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 89%|████████▉ | 3572/4000 [13:15:30<00:01, 252.79it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3576it [13:15:30, 251.33it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 90%|█████████ | 3600/4000 [13:15:30<00:01, 253.21it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3604it [13:15:30, 252.36it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 91%|█████████ | 3629/4000 [13:15:30<00:01, 262.31it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3633it [13:15:30, 261.98it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 91%|█████████▏| 3657/4000 [13:15:30<00:01, 263.13it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3661it [13:15:30, 263.51it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 92%|█████████▏| 3687/4000 [13:15:30<00:01, 271.31it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3691it [13:15:30, 270.86it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 93%|█████████▎| 3715/4000 [13:15:30<00:01, 268.74it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3719it [13:15:30, 268.42it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 94%|█████████▎| 3743/4000 [13:15:30<00:00, 263.37it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3747it [13:15:30, 263.16it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 94%|█████████▍| 3772/4000 [13:15:30<00:00, 269.24it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3776it [13:15:30, 269.25it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 95%|█████████▌| 3800/4000 [13:15:31<00:00, 272.20it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3804it [13:15:31, 271.31it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 96%|█████████▌| 3828/4000 [13:15:31<00:00, 272.80it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3832it [13:15:31, 272.72it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 96%|█████████▋| 3856/4000 [13:15:31<00:00, 273.31it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3860it [13:15:31, 273.24it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 97%|█████████▋| 3884/4000 [13:15:31<00:00, 274.32it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3888it [13:15:31, 274.16it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 98%|█████████▊| 3912/4000 [13:15:31<00:00, 271.25it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam


3916it [13:15:31, 271.72it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

 98%|█████████▊| 3940/4000 [13:15:31<00:00, 269.29it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

3944it [13:15:31, 267.49it/s][E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam
[E::hts_open_format] Failed to open file P001-0029_cfDNA_S14_mergerd.coord.sorted.markdup.withdisc_split_clip.hg38.bam

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3944it [13:15:51, 267.49it/s]
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