Jade's optimisers, CoalHMM, and admixture modeling
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README.md

README.md

Jocx

Jade's optimisers, CoalHMM, and admixture modeling

This program executes CoalHMM with a specified model and optimiser using a given sequence of data in the format of ziphmm directories. The program prints to standard output the progression of the estimated parameters and the corresponding log likelihood.