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Correct paths to profiles and valuesets/codesystems #568
Note, by fixing the paths to profiles and valuesets/codesystems for dstu2.1, this enabled additional parts of the validation code to run and then uncovered bugs due to lack of (implemented) valueset expand support and problems with FHIRPath strings in some resource profiles.
I've fixed these as best I can, but am not a FHIRPath expert so my fixes may not be accurate.