curatron

Prototype curation system

Tree Browser

To run the tree browser, you first need to place the following files (from IEDB) in the build/ directory: assay-tree.owl, disease-tree.owl, geolocation.owl, molecule-tree.owl, nonpeptide-tree.owl, organism-tree.owl, protein-tree.owl, and subspecies-tree.owl.

Then, create the SQLite databases:

make dbs

Finally, you can run the Flask app to see the tree browsers, which are located at the /browse path:

export FLASK_APP=src/run.py
flask run

You can also run this app as a CGI script.