Skip to content
Newer
Older
100644 31 lines (26 sloc) 724 Bytes
35cfa6d minimal setup to get into pythonpath
James Casbon authored Oct 30, 2011
1 from setuptools import setup
bc8c85e use ordered dict for samples, fixes #2
James Casbon authored Jan 16, 2012
2 import sys
3
4 requires = []
5
49e2e57 fix argparse requirement for python < 2.6
James Casbon authored Feb 3, 2012
6 # python 2.6 does not have argparse
7 try:
8 import argparse
9 except ImportError:
b59b6f7 argparse for python < 2.7
James Casbon authored Jan 17, 2012
10 requires.append('argparse')
35cfa6d minimal setup to get into pythonpath
James Casbon authored Oct 30, 2011
11
49e2e57 fix argparse requirement for python < 2.6
James Casbon authored Feb 3, 2012
12
35cfa6d minimal setup to get into pythonpath
James Casbon authored Oct 30, 2011
13 setup(
14 name='PyVCF',
7f7b7bd initial work on an extensible VCF filter
James Casbon authored Jan 17, 2012
15 py_modules=['vcf', 'vcf_filter'],
16 scripts=['vcf_melt', 'vcf_filter.py'],
9fcf4f6 add FILTERS.md
James Casbon authored Jan 20, 2012
17 author='James Casbon and @jdoughertyii',
60625ba add meta to setup.py, note about fork to README
James Casbon authored Jan 12, 2012
18 author_email='casbon@gmail.com',
19 description='Variant Call Format (VCF) parser for python',
b60d8fc run doctest, fixes #5
James Casbon authored Jan 16, 2012
20 test_suite='test.test_vcf.suite',
7f7b7bd initial work on an extensible VCF filter
James Casbon authored Jan 17, 2012
21 requires=requires,
22 entry_points = {
23 'vcf.filters': [
24 'site_quality = vcf_filter:SiteQuality',
fb49dd4 add filter lines, but writer needs improvement
James Casbon authored Jan 17, 2012
25 'vgq = vcf_filter:VariantGenotypeQuality',
7f7b7bd initial work on an extensible VCF filter
James Casbon authored Jan 17, 2012
26 ]
9fcf4f6 add FILTERS.md
James Casbon authored Jan 20, 2012
27 },
c0c7d16 version bump
James Casbon authored Jan 20, 2012
28 url='https://github.com/jamescasbon/PyVCF',
566f76c sphinx docs, closes #11
James Casbon authored Jan 25, 2012
29 version='0.2.2'
35cfa6d minimal setup to get into pythonpath
James Casbon authored Oct 30, 2011
30 )
Something went wrong with that request. Please try again.