Performance benchmarks #67

superbobry opened this Issue Jul 31, 2012 · 2 comments


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Does PyVCF have any? I'm trying to parse dbSNP release with the latest version and it basically takes forever. So having some kind of performance metric would be handy for further development.


See #6 and #25. There are also branches performance (obsolete) and cython2 (I think still undecided?).

Complementing the performance tests with orthogonal cases is of course welcome.


Thanks, closing the issue then, will continue in #6, after I check out @jamescasbon's script.

@superbobry superbobry closed this Aug 6, 2012
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