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A Variant Call Format reader for Python.
Workshop for Org-mode with focus on todo-, project- and workflow-management
vertica dialect for sqlalchemy
Open software engineering platform and fun adventure game
Cython-based, NumPy-aware automatic wrapper generation for C / C++.
My vim setup
Sodium - Reactive Programming Library for Java, Haskell and C++ (FRP)
Cython rectangle example using xdress generation
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
Ship virtualenvs as deb or rpm
The community-driven framework for configuring Zsh.
cutadapt removes adapter sequences from DNA sequencing reads
Simple interval class for fast fasta access
Tornado is an open source version of the scalable, non-blocking web server and tools that power FriendFeed.
Jade syntax adapter for Django, Jinja2 and Mako templates
CSV but without the suck
extract 454 Genome Sequencer reads from a SFF file and convert them into a FASTQ formatted output
Honcho: a python clone of Foreman. For managing Procfile-based applications
Python web server benchmarks
The Bottle Plugin Collection (beta)
Python wrapper -- and more -- for Aaron Quinlan's BEDTools (bioinformatics tools)
Cucumber-ish BDD for python
Vim plugin to make Posterous posts from inside Vim
Rewrite of codenode with backbone/mongo
fast, memory-efficient, pythonic (and command-line) access to fasta sequence files
experiments with backbone.js, flask and mongo