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Commits on Dec 23, 2017
  1. Updated README.DEV

    jandot committed Dec 23, 2017
Commits on Aug 21, 2008
  1. added spliced support for transcript glyph

    dgtized authored and jandot committed Jul 22, 2008
  2. Panel.format= now validates format type

    Charles Comstock authored and jandot committed Jul 22, 2008
  3. changed Panel.new to accept a range and removed display_{start,stop}

    Charles Comstock authored and jandot committed Jul 18, 2008
  4. simplification of Glyph::Common to remove from / to variables and sim…

    Charles Comstock authored and jandot committed Jul 18, 2008
    …plify {left,right}_pixel
  5. fix test_imagemap so it can be tested from bio-graphics root

    Charles Comstock authored and jandot committed Jul 18, 2008
Commits on Jun 30, 2008
Commits on Jun 3, 2008
Commits on May 29, 2008
  1. Updated contact information

    jandot committed May 29, 2008
Commits on Feb 25, 2008
  1. * Added scripts/gff2png.rb to convert simple GFF files into PNGs.

    jandot
    jandot committed Feb 25, 2008
    * Set feature#glyph, feature#colour, subfeature#glyph and subfeature#colour at draw-time rather than at initialization. This allows for changing the 
    glyphs of all features in a track _after_ the actual features have been added to that track.
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@58 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  2. * Colour of glyph moved to just before actual drawing of subfeature.

    jandot
    jandot committed Feb 25, 2008
    * Test test_draw.rb now includes dynamic setting of colour using lambda.
    * Bug fixed: major ticks and numbers not shown in ruler (bug #18365)
    * Numbers in ruler now commified
    * New glyph: arrow
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@57 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Feb 20, 2008
  1. * Minor change in Bio::Feature to follow ducktyping principle instead…

    jandot
    jandot committed Feb 20, 2008
    … of class checking.
    
    * Made example of dynamic setting of colour more explicit in samples/arkdb_features.rb
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@56 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Feb 19, 2008
  1. * extracted much of the ruler drawing code

    dgtized
    dgtized committed Feb 19, 2008
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@55 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  2. * extracted image_map draw code into ImageMap#save

    dgtized
    dgtized committed Feb 19, 2008
     * extracted flip_orientation code in Panel
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@54 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  3. * Minor corrections in TUTORIAL

    jandot
    jandot committed Feb 19, 2008
    * Minor rewriting of code to choose glyph in subfeature.
    * Added functionality to set the colour of features dynamically using a lambda function.
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@53 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Feb 7, 2008
  1. use object inheritence to determine glyph specific left/right_pixel b…

    dgtized
    dgtized committed Feb 7, 2008
    …oundaries
    
    instead of explicit conditionals
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@52 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Jan 24, 2008
  1. * Made optional arguments to be defined as keyword arguments.

    jandot
    jandot committed Jan 24, 2008
    * Created bio-graphics-1.4.gem
    
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@51 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Dec 6, 2007
  1. * Added tests for:

    jandot
    jandot committed Dec 6, 2007
      - features that are partly outside of view
      - image map
      - extensions of core classes String and Range
    * Removed output of empty lines in image map
    * html file in panel is now getting closed (and therefore flushed)
    * fixed bug in glyphs/common.rb: hidden_subfeatures_at_start/stop
    * fixed bug in String#snake_case
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@50 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Dec 4, 2007
  1. Fixed bug with image map for vertical pictures.

    jandot
    jandot committed Dec 4, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@49 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Nov 30, 2007
  1. Created test for custom glyphs:

    jandot
    jandot committed Nov 30, 2007
    * if glyph defined within the user script
    * if glyph file added to lib/bio/graphics/glyphs
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@48 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  2. * Removed stale private methods that were moved to glyphs/common.rb

    jandot
    jandot committed Nov 30, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@47 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  3. * Merged branches/small_contexts into trunk

    jandot
    jandot committed Nov 30, 2007
        for reference: in bio-graphics/ directory:
          svn merge -r 43:HEAD ./branches/small_contexts/ ./trunk/
    * bug in Panel#draw fixed
    * corrected misspellings vertical (was: 'verticle')
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@46 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  4. * Extracted glyphs into separate files.

    jandot
    jandot committed Nov 30, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@45 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Nov 29, 2007
  1. * Features have their own context instead of using the track one.

    jandot
    jandot committed Nov 29, 2007
    * Renamed the cairo-related variables to better reflect the cairo nomenclature.
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@44 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  2. Creating a branch to investigate smaller contexts for Features

    jandot
    jandot committed Nov 29, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@43 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Nov 28, 2007
  1. ImageMap now always created. Just not rendered into html if not click…

    jandot
    jandot committed Nov 28, 2007
    …able.
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@42 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  2. Added support for saving to PDF, PS and SVG.

    jandot
    jandot committed Nov 28, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@41 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  3. Created teardown which can be easily commented out so that the genera…

    jandot
    jandot committed Nov 28, 2007
    …ted PNGs are not deleted.
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@40 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Nov 27, 2007
  1. * converted Track to use hash arguments

    dgtized
    dgtized committed Nov 27, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@39 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  2. * switched from display_start and display_end to display_range

    dgtized
    dgtized committed Nov 27, 2007
     * random cleanup in Ruler#draw to use instance variables instead of accessors
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@38 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb