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Commits on Nov 27, 2007
  1. * added some tests for ruler

    dgtized
    dgtized committed Nov 27, 2007
     * fixed ruler to display tick marks correctly on all cases in test_draw
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@37 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  2. * moved everything but subfeature to exist directly under Bio::Graphics

    dgtized
    dgtized committed Nov 27, 2007
     * use ImageMap#add_element instead of #elements.push(ImageMap::Element.new)
     * fixed use of :start,:stop instead of :display_start, :display_stop
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@36 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  3. Added test for display_start and display_stop. Test can be used to ch…

    jandot
    jandot committed Nov 27, 2007
    …eck if numbers on ruler are drawn.
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@35 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Nov 25, 2007
  1. moved Ruler to Bio::Graphics::Ruler and removed full path from use in

    dgtized
    dgtized committed Nov 25, 2007
    Panel
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@34 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  2. moved ImageMap into Bio::Graphics and changed ImageMap::ImageMapElement

    dgtized
    dgtized committed Nov 25, 2007
    to ImageMap::Element
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@33 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Nov 24, 2007
  1. converted Bio::Graphics::Panel.new to use hash arguments for changing

    dgtized
    dgtized committed Nov 24, 2007
    default options
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@32 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Nov 21, 2007
  1. Added documentation on how to contribute, including coding style.

    jandot
    jandot committed Nov 21, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@31 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  2. * removed some constants from Panel and changed them into instance v…

    dgtized
    dgtized committed Nov 21, 2007
    …ariables on Ruler
    
     * Ruler is now completely parameterized and autoscales accordingly
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@30 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Nov 20, 2007
  1. * calculate some values in ruler directly instead of looping until a…

    dgtized
    dgtized committed Nov 20, 2007
    … value meets a condition
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@29 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  2. * set svn:eol-style to native for everything

    dgtized
    dgtized committed Nov 20, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@28 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  3. * replaced PixelRange with a Range class, and added lend/rend aliase…

    dgtized
    dgtized committed Nov 20, 2007
    …s to Range
    
     * extracted common code in Feature initializer to use add_subfeature
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@27 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Nov 19, 2007
  1. Added gem v1.3

    jandot
    jandot committed Nov 19, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@26 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  2. Trivial changes in documentation.

    jandot
    jandot committed Nov 19, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@25 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  3. svn:ignore didn't ignore. Path changed.

    jandot
    jandot committed Nov 19, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@24 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  4. Deleted doc directory. Now svn-ignored.

    jandot
    jandot committed Nov 19, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@23 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Nov 16, 2007
  1. Added support for subfeatures.

    jandot
    jandot committed Nov 16, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@22 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Nov 8, 2007
  1. Added support for subfeatures and therefore the drawing of composite …

    jandot
    jandot committed Nov 8, 2007
    …features (e.g. transcripts with UTRs and a CDS)
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@21 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Oct 26, 2007
  1. Fixed small bug in test code: test could only be run from the test/un…

    jandot
    jandot committed Oct 26, 2007
    …it directory.
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@20 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Oct 25, 2007
  1. Fixed little bug in bio-graphics.rb

    jandot
    jandot committed Oct 25, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@19 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  2. * Feature#draw refactored by Charles Comstock.

    jandot
    jandot committed Oct 25, 2007
    * Added unit test for the drawing code.
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@18 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Oct 18, 2007
  1. Added rake task for uploading documentation to project website.

    jandot
    jandot committed Oct 18, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@17 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  2. * Refactor of Feature#draw code by Charles Comstock and Jan Aerts.

    jandot
    jandot committed Oct 18, 2007
    * Addition of :line glyph.
    * Labels can now be displayed as well.
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@16 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  3. Added possibility to display the labels for features. This can be set…

    jandot
    jandot committed Oct 18, 2007
    … at the track level: some tracks can show labels while others will not.
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@15 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Oct 10, 2007
  1. * Made vertical_offset an instance variable to track instead of passi…

    jandot
    jandot committed Oct 10, 2007
    …ng it
    
      around everywhere.
    * Refactored drawing code: drawing is now done by the feature instead of the track
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@14 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  2. * Made vertical_offset an instance variable to track instead of passi…

    jandot
    jandot committed Oct 10, 2007
    …ng it
    
      around everywhere.
    * Refactored drawing code: drawing is now done by the feature instead of the track
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@13 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Oct 9, 2007
  1. Creating branch to move drawing code to feature or glyph

    jandot
    jandot committed Oct 9, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@12 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  2. Created trunk, branches and tags

    jandot
    jandot committed Oct 9, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@11 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  3. * Added unit test for object creation.

    jandot
    jandot committed Oct 9, 2007
    * Fixed bug in panel if display_start or display_stop don't lie within the actual sequence
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@10 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  4. Let creation of RDoc and gem depend on whether there have been change…

    jandot
    jandot committed Oct 9, 2007
    …s in the library itself.
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@9 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  5. Added Rakefile to do SVN commits, create RDoc and create gem.

    jandot
    jandot committed Oct 9, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@8 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Oct 5, 2007
  1. Small change in tutorial

    jandot
    jandot committed Oct 5, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@7 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Oct 1, 2007
  1. * Added README.DEV

    jandot
    jandot committed Oct 1, 2007
    * Trivial changes in TUTORIAL
    * Trivial changes in lib/bio/graphics/panel.rb
    * Trivial changes in lib/bio/graphics/track.rb
    * Trivial changes in lib/bio/graphics/ruler.rb
    * Trivial changes in lib/bio/graphics/feature.rb
    * Fixed but in track.rb: no line to edge of picture was draw if hidden subfeatures outside of view
    * Rebuilt gem
    
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@6 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Sep 28, 2007
  1. Started writing README.DEV

    jandot
    jandot committed Sep 28, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@5 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
Commits on Sep 26, 2007
  1. Moved all files to top-level, so we don't have bio-graphics/bio-graph…

    jandot
    jandot committed Sep 26, 2007
    …ics/ anymore.
    
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@4 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb
  2. Changed tutorial

    jandot
    jandot committed Sep 26, 2007
    git-svn-id: svn+ssh://rubyforge.org/var/svn/bio-graphics@3 a2f46d20-7dc0-45cf-9d05-bfa4e4ff58eb