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d924a08 ARA & cyanobacteria nested ANOVA - Output Results
Jonathan A. Whiteley authored Mar 26, 2011
1 Nested ANOVA Results for: Cyanobacteria Cell Density ( Cells.m )
aa8330a Time as a treatment in Nested ANOVA
Jonathan A. Whiteley authored Mar 28, 2011
2 Transformation used: Y.4rt
967f795 Minor change to label of Time factor in output header.
Jonathan A. Whiteley authored Mar 29, 2011
3 Expt. Time: 12 months
d924a08 ARA & cyanobacteria nested ANOVA - Output Results
Jonathan A. Whiteley authored Mar 26, 2011
4 Chamber: Ambient, Full Chamber
5 Fragmentation: Continuous, Full Corridors, Pseudo-Corridors, Isolated
6 Patches: Inner, Outer
7
0d91dc7 git clean-up of untracked files. Re-run CH1 analyses
Jonathan A. Whiteley authored Jan 20, 2012
8 Fri Jan 20 21:39:17 2012
d924a08 ARA & cyanobacteria nested ANOVA - Output Results
Jonathan A. Whiteley authored Mar 26, 2011
9
10 ================================================================
aa8330a Time as a treatment in Nested ANOVA
Jonathan A. Whiteley authored Mar 28, 2011
11 ================ Patch scale Results =========================
d924a08 ARA & cyanobacteria nested ANOVA - Output Results
Jonathan A. Whiteley authored Mar 26, 2011
12
13 Y.trans ~ Chamber * Frag * Position + Error(Block/Chamber/Frag)
14
15 Error: Block
16 Df Sum Sq Mean Sq F value Pr(>F)
17 Residuals 7 73640 10520
18
19 Error: Block:Chamber
20 Df Sum Sq Mean Sq F value Pr(>F)
21 Chamber 1 298 297.6 0.0561 0.8196
22 Residuals 7 37152 5307.4
23
24 Error: Block:Chamber:Frag
25 Df Sum Sq Mean Sq F value Pr(>F)
26 Frag 3 11759 3919.6 1.0059 0.3997
27 Chamber:Frag 3 7120 2373.3 0.6090 0.6129
28 Residuals 42 163665 3896.8
29
30 Error: Within
31 Df Sum Sq Mean Sq F value Pr(>F)
32 Position 1 11333 11333.1 2.8624 0.09623 .
33 Chamber:Position 1 1054 1053.6 0.2661 0.60798
34 Frag:Position 3 3412 1137.5 0.2873 0.83437
35 Chamber:Frag:Position 3 8741 2913.7 0.7359 0.53501
36 Residuals 56 221721 3959.3
37 ---
aa8330a Time as a treatment in Nested ANOVA
Jonathan A. Whiteley authored Mar 28, 2011
38 Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
d924a08 ARA & cyanobacteria nested ANOVA - Output Results
Jonathan A. Whiteley authored Mar 26, 2011
39
40
41 Tables of means
42 Grand mean
43
44 118.5282
45
46 Chamber
47 Chamber
48 Ambient Full Chamber
49 117.00 120.05
50
51 Frag
52 Frag
53 Continuous Full Corridors Pseudo-Corridors Isolated
54 102.58 126.92 119.64 124.98
55
56 Position
57 Position
58 Inner Outer
59 127.94 109.12
60
61 Chamber:Frag
62 Frag
63 Chamber Continuous Full Corridors Pseudo-Corridors Isolated
64 Ambient 101.15 127.79 106.53 132.54
65 Full Chamber 104.02 126.04 132.74 117.41
66
67 Chamber:Position
68 Position
69 Chamber Inner Outer
70 Ambient 123.54 110.46
71 Full Chamber 132.33 107.77
72
73 Frag:Position
74 Position
75 Frag Inner Outer
76 Continuous 116.17 88.99
77 Full Corridors 131.09 122.74
78 Pseudo-Corridors 124.04 115.23
79 Isolated 140.45 109.51
80
81 Chamber:Frag:Position
82 , , Position = Inner
83
84 Frag
85 Chamber Continuous Full Corridors Pseudo-Corridors Isolated
86 Ambient 123.80 131.47 97.53 141.37
87 Full Chamber 108.54 130.72 150.55 139.52
88
89 , , Position = Outer
90
91 Frag
92 Chamber Continuous Full Corridors Pseudo-Corridors Isolated
93 Ambient 78.50 124.11 115.53 123.72
94 Full Chamber 99.49 121.37 114.94 95.30
95
96
0f1f52c Applied new MSR to ARA & Cyanobacteria Results
Jonathan A. Whiteley authored Mar 29, 2011
97 95% Minimum Significant Ranges (MSR):
3dcc53b Adjustments to jaw.ggplot() custom theme & re-plotting
Jonathan A. Whiteley authored Jan 20, 2012
98 Chamber Frag Position Chamber:Frag
99 29.21489 44.70007 25.23328 73.41196
100 Chamber:Position Frag:Position Chamber:Frag:Position
101 45.05723 73.99852 117.47377
d924a08 ARA & cyanobacteria nested ANOVA - Output Results
Jonathan A. Whiteley authored Mar 26, 2011
102
103
104 ================================================================
105 ================ Meta-Community scale Results ================
106 ================================================================
aa8330a Time as a treatment in Nested ANOVA
Jonathan A. Whiteley authored Mar 28, 2011
107 Y.trans ~ Chamber * Frag + Error(Block/Chamber)
d924a08 ARA & cyanobacteria nested ANOVA - Output Results
Jonathan A. Whiteley authored Mar 26, 2011
108
109 Error: Block
110 Df Sum Sq Mean Sq F value Pr(>F)
111 Residuals 7 38680 5525.7
112
113 Error: Block:Chamber
114 Df Sum Sq Mean Sq F value Pr(>F)
115 Chamber 1 1935.5 1935.5 0.655 0.445
116 Residuals 7 20685.4 2955.1
117
aa8330a Time as a treatment in Nested ANOVA
Jonathan A. Whiteley authored Mar 28, 2011
118 Error: Within
d924a08 ARA & cyanobacteria nested ANOVA - Output Results
Jonathan A. Whiteley authored Mar 26, 2011
119 Df Sum Sq Mean Sq F value Pr(>F)
120 Frag 3 2892 964.1 0.3921 0.7593
121 Chamber:Frag 3 4959 1653.2 0.6723 0.5738
122 Residuals 42 103273 2458.9
123
124
125 Tables of means
126 Grand mean
127
128 133.8295
129
130 Chamber
131 Chamber
132 Ambient Full Chamber
133 128.33 139.33
134
135 Frag
136 Frag
137 Continuous Full Corridors Pseudo-Corridors Isolated
138 123.51 140.70 132.31 138.80
139
140 Chamber:Frag
141 Frag
142 Chamber Continuous Full Corridors Pseudo-Corridors Isolated
143 Ambient 109.81 142.94 117.48 143.09
144 Full Chamber 137.21 138.46 147.13 134.51
145
0f1f52c Applied new MSR to ARA & Cyanobacteria Results
Jonathan A. Whiteley authored Mar 29, 2011
146 95% Minimum Significant Ranges (MSR):
d924a08 ARA & cyanobacteria nested ANOVA - Output Results
Jonathan A. Whiteley authored Mar 26, 2011
147 Chamber Frag Chamber:Frag
0f1f52c Applied new MSR to ARA & Cyanobacteria Results
Jonathan A. Whiteley authored Mar 29, 2011
148 31.21841 51.12072 84.51135
d924a08 ARA & cyanobacteria nested ANOVA - Output Results
Jonathan A. Whiteley authored Mar 26, 2011
149
150
aa8330a Time as a treatment in Nested ANOVA
Jonathan A. Whiteley authored Mar 28, 2011
151 <============================= END ============================>
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