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Copy pathfind_parallel_flow.rs
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executable file
·330 lines (300 loc) · 11.8 KB
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/*
This tool is part of the WhiteboxTools geospatial analysis library.
Authors: Dr. John Lindsay
Created: 11/07/2017
Last Modified: 12/10/2018
License: MIT
*/
use whitebox_raster::*;
use whitebox_common::structures::Array2D;
use crate::tools::*;
use num_cpus;
use std::env;
use std::f64;
use std::io::{Error, ErrorKind};
use std::path;
use std::sync::mpsc;
use std::sync::Arc;
use std::thread;
/// This tool can be used to find cells in a stream network grid that possess parallel flow directions based
/// on an input D8 flow-pointer grid (`D8Pointer`). Because streams rarely flow in parallel for significant
/// distances, these areas are likely errors resulting from the biased assignment of flow direction based on
/// the D8 method.
///
/// # See Also
/// `D8Pointer`
pub struct FindParallelFlow {
name: String,
description: String,
toolbox: String,
parameters: Vec<ToolParameter>,
example_usage: String,
}
impl FindParallelFlow {
pub fn new() -> FindParallelFlow {
// public constructor
let name = "FindParallelFlow".to_string();
let toolbox = "Hydrological Analysis".to_string();
let description = "Finds areas of parallel flow in D8 flow direction rasters.".to_string();
let mut parameters = vec![];
parameters.push(ToolParameter {
name: "Input D8 Pointer File".to_owned(),
flags: vec!["--d8_pntr".to_owned()],
description: "Input D8 pointer raster file.".to_owned(),
parameter_type: ParameterType::ExistingFile(ParameterFileType::Raster),
default_value: None,
optional: false,
});
parameters.push(ToolParameter {
name: "Input Streams File".to_owned(),
flags: vec!["--streams".to_owned()],
description: "Input raster streams file.".to_owned(),
parameter_type: ParameterType::ExistingFile(ParameterFileType::Raster),
default_value: None,
optional: false,
});
parameters.push(ToolParameter {
name: "Output File".to_owned(),
flags: vec!["-o".to_owned(), "--output".to_owned()],
description: "Output raster file.".to_owned(),
parameter_type: ParameterType::NewFile(ParameterFileType::Raster),
default_value: None,
optional: false,
});
let sep: String = path::MAIN_SEPARATOR.to_string();
let e = format!("{}", env::current_exe().unwrap().display());
let mut parent = env::current_exe().unwrap();
parent.pop();
let p = format!("{}", parent.display());
let mut short_exe = e
.replace(&p, "")
.replace(".exe", "")
.replace(".", "")
.replace(&sep, "");
if e.contains(".exe") {
short_exe += ".exe";
}
let usage = format!(
">>.*{0} -r={1} -v --wd=\"*path*to*data*\" --d8_pntr=pointer.tif -o=out.tif
>>.*{0} -r={1} -v --wd=\"*path*to*data*\" --d8_pntr=pointer.tif -o=out.tif --streams='streams.tif'",
short_exe, name
)
.replace("*", &sep);
FindParallelFlow {
name: name,
description: description,
toolbox: toolbox,
parameters: parameters,
example_usage: usage,
}
}
}
impl WhiteboxTool for FindParallelFlow {
fn get_source_file(&self) -> String {
String::from(file!())
}
fn get_tool_name(&self) -> String {
self.name.clone()
}
fn get_tool_description(&self) -> String {
self.description.clone()
}
fn get_tool_parameters(&self) -> String {
match serde_json::to_string(&self.parameters) {
Ok(json_str) => return format!("{{\"parameters\":{}}}", json_str),
Err(err) => return format!("{:?}", err),
}
}
fn get_example_usage(&self) -> String {
self.example_usage.clone()
}
fn get_toolbox(&self) -> String {
self.toolbox.clone()
}
fn run<'a>(
&self,
args: Vec<String>,
working_directory: &'a str,
verbose: bool,
) -> Result<(), Error> {
let mut d8_file = String::new();
let mut use_streams = false;
let mut streams_file = String::new();
let mut output_file = String::new();
if args.len() == 0 {
return Err(Error::new(
ErrorKind::InvalidInput,
"Tool run with no parameters.",
));
}
for i in 0..args.len() {
let mut arg = args[i].replace("\"", "");
arg = arg.replace("\'", "");
let cmd = arg.split("="); // in case an equals sign was used
let vec = cmd.collect::<Vec<&str>>();
let mut keyval = false;
if vec.len() > 1 {
keyval = true;
}
if vec[0].to_lowercase() == "-d8_pntr" || vec[0].to_lowercase() == "--d8_pntr" {
if keyval {
d8_file = vec[1].to_string();
} else {
d8_file = args[i + 1].to_string();
}
} else if vec[0].to_lowercase() == "-streams" || vec[0].to_lowercase() == "--streams" {
if keyval {
streams_file = vec[1].to_string();
} else {
streams_file = args[i + 1].to_string();
}
if !streams_file.is_empty() {
use_streams = true;
}
} else if vec[0].to_lowercase() == "-o" || vec[0].to_lowercase() == "--output" {
if keyval {
output_file = vec[1].to_string();
} else {
output_file = args[i + 1].to_string();
}
}
}
if verbose {
let tool_name = self.get_tool_name();
let welcome_len = format!("* Welcome to {} *", tool_name).len().max(28);
// 28 = length of the 'Powered by' by statement.
println!("{}", "*".repeat(welcome_len));
println!("* Welcome to {} {}*", tool_name, " ".repeat(welcome_len - 15 - tool_name.len()));
println!("* Powered by WhiteboxTools {}*", " ".repeat(welcome_len - 28));
println!("* www.whiteboxgeo.com {}*", " ".repeat(welcome_len - 23));
println!("{}", "*".repeat(welcome_len));
}
let sep: String = path::MAIN_SEPARATOR.to_string();
if !d8_file.contains(&sep) && !d8_file.contains("/") {
d8_file = format!("{}{}", working_directory, d8_file);
}
if !output_file.contains(&sep) && !output_file.contains("/") {
output_file = format!("{}{}", working_directory, output_file);
}
let pntr = Arc::new(Raster::new(&d8_file, "r")?);
let start = Instant::now();
let mut progress: i32;
let mut old_progress: i32 = -1;
let rows = pntr.configs.rows as isize;
let columns = pntr.configs.columns as isize;
let nodata = pntr.configs.nodata;
let streams_nodata: f64;
let streams: Array2D<f64> = match use_streams {
false => {
streams_nodata = -32768.0;
Array2D::new(1, 1, 1f64, 1f64)?
}
true => {
if verbose {
println!("Reading streams data...")
};
let r = Raster::new(&streams_file, "r")?;
if r.configs.rows != rows as usize || r.configs.columns != columns as usize {
return Err(Error::new(ErrorKind::InvalidInput,
"The input files must have the same number of rows and columns and spatial extent."));
}
streams_nodata = r.configs.nodata;
r.get_data_as_array2d()
}
};
let mut output = Raster::initialize_using_file(&output_file, &pntr);
let streams = Arc::new(streams);
let mut num_procs = num_cpus::get() as isize;
let configs = whitebox_common::configs::get_configs()?;
let max_procs = configs.max_procs;
if max_procs > 0 && max_procs < num_procs {
num_procs = max_procs;
}
let (tx, rx) = mpsc::channel();
for tid in 0..num_procs {
let pntr = pntr.clone();
let streams = streams.clone();
let tx = tx.clone();
thread::spawn(move || {
let mut z: f64;
let mut zn: f64;
let mut stream_val: f64;
let mut stream_valn: f64;
let mut is_parallel: bool;
let dx = [1, 1, 1, 0, -1, -1, -1, 0];
let dy = [-1, 0, 1, 1, 1, 0, -1, -1];
let inflowing_vals = [16f64, 32f64, 64f64, 128f64, 1f64, 2f64, 4f64, 8f64];
let outflowing_vals = [1f64, 2f64, 4f64, 8f64, 16f64, 32f64, 64f64, 128f64];
for row in (0..rows).filter(|r| r % num_procs == tid) {
let mut data = vec![nodata; columns as usize];
for col in 0..columns {
z = pntr[(row, col)];
stream_val = streams[(row, col)];
if z != nodata && stream_val != streams_nodata && stream_val > 0f64 {
is_parallel = false;
for n in 0..8 {
if z != outflowing_vals[n] {
zn = pntr[(row + dy[n], col + dx[n])];
stream_valn = streams[(row + dy[n], col + dx[n])];
if zn == z
&& zn != inflowing_vals[n]
&& stream_valn > 0f64
&& stream_valn != streams_nodata
{
is_parallel = true;
break;
}
}
}
if is_parallel {
data[col as usize] = 1f64;
} else {
data[col as usize] = 0f64;
}
}
}
tx.send((row, data)).unwrap();
}
});
}
for row in 0..rows {
let data = rx.recv().expect("Error receiving data from thread.");
output.set_row_data(data.0, data.1);
if verbose {
progress = (100.0_f64 * row as f64 / (rows - 1) as f64) as i32;
if progress != old_progress {
println!("Progress: {}%", progress);
old_progress = progress;
}
}
}
let elapsed_time = get_formatted_elapsed_time(start);
output.add_metadata_entry(format!(
"Created by whitebox_tools\' {} tool",
self.get_tool_name()
));
output.add_metadata_entry(format!("Input D8 pointer file: {}", d8_file));
if use_streams {
output.add_metadata_entry(format!("Input streams file: {}", streams_file));
}
output.add_metadata_entry(format!("Elapsed Time (excluding I/O): {}", elapsed_time));
if verbose {
println!("Saving data...")
};
let _ = match output.write() {
Ok(_) => {
if verbose {
println!("Output file written")
}
}
Err(e) => return Err(e),
};
if verbose {
println!(
"{}",
&format!("Elapsed Time (excluding I/O): {}", elapsed_time)
);
}
Ok(())
}
}