Map mutational paths through protein sequence space
Python C
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README.rst

mutpath is a Python package for identifying mutational paths through sequence space generated using the MarkovJumps feature of BEAST.

mutpath source code is available on GitHub at https://github.com/jbloom/mutpath

mutpath documentation is available at http://jbloom.github.com/mutpath/

mutpath was written by Jesse Bloom. It takes advantage of the MarkovJumps feature added to BEAST by Marc Suchard.

If you use this software package, please cite the following reference for mutpath's approach to building mutational paths: Gong et al, 2013.

mutpath is free software under the GPLv3 license.

Specific examples of usage included in this package: