Skip to content
master
Switch branches/tags
Code

Latest commit

 

Git stats

Files

Permalink
Failed to load latest commit information.
Type
Name
Latest commit message
Commit time
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Release

BACteria in Mother Maching Analyzer (BACMMAN) is a software allowing fast and reliable automated image analysis of high-throughput 2D/3D time-series images from mother machine. Mother machine is a very popular microfluidic device allowing investigating biological processes in bacteria at the single-cell level.

Application

BACMMAN can process this kind of data:

Fluorescence Images Phase-contrast Images

See the wiki for detailed information

Publications

Licence

BACMMAN is a free/libre open source software under GNU General Public License v3.0 (see license)

Structure of repository

BACMMAN is composed of several modules:

  • The core module on which depend all other modules
  • The graphical user interface
  • Mother machine modules: image processing modules specifically designed for analysis of mother machine experiments
  • IJ1 binding integration in FIJI environment
  • Headless for run in command line mode