Skip to content
Browse files

New refs and resolve duplicates with petsc

  • Loading branch information...
1 parent 68398bc commit 81e15faa2cc36fcece4a4f0232c53ac55a4078ad @jedbrown committed Jan 10, 2014
Showing with 657 additions and 50 deletions.
  1. +657 −50 jedbib.bib
View
707 jedbib.bib
@@ -1306,19 +1306,6 @@ @article{ffhbresso2008
year = 2008,
url = "http://www.tacc.utexas.edu/research/users/features/laser_surgery.pdf"
}
-@techreport{dobbhbbbdeffghkkps2008,
- author = {{K. R. Diller and J. T. Oden and C. Bajaj and
- J. C. Browne and J. Hazle and
- I. Babu{\v{s}}ka and J. Bass and L. Bidaut
- and L. Demkowicz and A. Elliott and Y. Feng and
- D. Fuentes and S. Goswami and A. Hawkins and
- S. Khoshnevis and B. Kwon and S. Prudhomme and
- R. J. Stafford}},
- title = "Computational Infrastructure for the Real-Time Patient-Specific Treatment of Cancer",
- year = 2008,
- institution = "University of Texas at Austin",
- url = "http://www.tacc.utexas.edu/research/users/features/cancer.pdf"
-}
@article{papanastasiou1992nob,
title={{A new outflow boundary condition}},
author={Papanastasiou, T.C. and Malamataris, N. and Ellwood, K.R.J.},
@@ -1823,13 +1810,6 @@ @article{evans2007lol
year={2007},
publisher={American Mathematical Society}
}
-@TechReport{ml-guide,
- author = {M.W. Gee and C.M. Siefert and J.J. Hu and R.S. Tuminaro and M.G. Sala},
- title = {{ML} 5.0 Smoothed Aggregation User's Guide},
- institution = {Sandia National Laboratories},
- year = {2006},
- number = {SAND2006-2649},
-}
@Article{libmesh,
author = {B.~Kirk and J.~W.~Peterson and R.~H.~Stogner and G.~F.~Carey},
title = {\texttt{libMesh}: A {C++} Library for Parallel Adaptive Mesh
@@ -2094,6 +2074,26 @@ @article{butcher2006error
year={2006},
publisher={Elsevier}
}
+@article{butcher1976implementation,
+ title={On the implementation of implicit {R}unge-{K}utta methods},
+ author={Butcher, John C.},
+ journal={BIT Numerical Mathematics},
+ volume={16},
+ number={3},
+ pages={237--240},
+ year={1976},
+ publisher={Springer}
+}
+@article{bickart1977efficient,
+ title={An efficient solution process for implicit {R}unge-{K}utta methods},
+ author={Bickart, Theodore A},
+ journal={SIAM Journal on Numerical Analysis},
+ volume={14},
+ number={6},
+ pages={1022--1027},
+ year={1977},
+ publisher={SIAM}
+}
@misc{podhaisky2006atlas,
title={Atlas of general linear methods with inherent {R}unge-{K}utta stability},
author={Podhaisky, H.},
@@ -2240,6 +2240,15 @@ @article{erlangga2004class
year={2004},
publisher={Elsevier}
}
+@article{erlangga2008multilevel,
+ title={On a multilevel Krylov method for the Helmholtz equation preconditioned by shifted Laplacian},
+ author={Erlangga, Yogi A and Nabben, Reinhard},
+ journal={Electronic Transactions on Numerical Analysis},
+ volume={31},
+ number={403-424},
+ pages={3},
+ year={2008}
+}
@article{li2007bddc,
title={{A BDDC Preconditioner for Saddle Point Problems}},
author={Li, J. and Widlund, O.},
@@ -2249,12 +2258,6 @@ @article{li2007bddc
year={2007},
publisher={Springer}
}
-@book{toselli2005domain,
- title={{Domain decomposition methods--algorithms and theory}},
- author={Toselli, A. and Widlund, O.B.},
- year={2005},
- publisher={Springer Verlag}
-}
@article{kershaw1978incomplete,
title={{The incomplete Cholesky- Conjugate gradient method for the iterative solution of systems of linear equations(for computerized simulation of laser fusion)}},
author={Kershaw, D.S.},
@@ -3117,13 +3120,41 @@ @article{brandt2011bootstrap
year={2011},
publisher={SIAM}
}
+@article{brandt1986algebraic,
+ title={Algebraic multigrid theory: The symmetric case},
+ author={Brandt, Achi},
+ journal={Applied Mathematics and Computation},
+ volume={19},
+ number={1},
+ pages={23--56},
+ year={1986},
+ publisher={Elsevier}
+}
+@article{ruge1987algebraic,
+ title={Algebraic multigrid},
+ author={Ruge, J.W. and St{\"u}ben, Klaus},
+ journal={Multigrid methods},
+ volume={3},
+ pages={73--130},
+ year={1987},
+ publisher={SIAM, Philadelphia}
+}
@article{brandt1979multigrid,
title={{Multigrid solutions to elliptic flow problems}},
author={Brandt, A. and Dinar, N.},
journal={Numerical Methods for Partial Differential Equations},
pages={53--147},
year={1979}
}
+@inbook{brandt1979singular,
+ title={Multi-Level Adaptive Techniques(MLAT) for singular-perturbation problems},
+ author={Achi Brandt},
+ booktitle={Numerical Analysis of Singular Perturbation Problems},
+ editor={Hemker, Pieter W. and Miller, John J.H.},
+ pages={53--142},
+ year={1979},
+ publisher={Academic Press}
+}
@article{brandt1990matrix,
title={Multilevel matrix multiplication and fast solution of integral equations},
author={Brandt, A. and Lubrecht, AA},
@@ -3472,8 +3503,11 @@ @article{malas2012streaming
title={Optimizing the Performance of Streaming Numerical Kernels on the {IBM BlueGene/P PowerPC} 450 Processor},
author={Tareq M. Malas and Aron J. Ahmadia and Jed Brown and John A. Gunnels and David E. Keyes},
journal={International Journal of High Performance Computing Applications},
- volume={published online},
- year={2012},
+ volume={27},
+ number={2},
+ pages={193--209},
+ year={2013},
+ publisher={SAGE Publications},
doi={10.1177/1094342012444795}
}
@misc{eichenberger2010shared,
@@ -5446,26 +5480,6 @@ @article{lieberman2010parameter
pages={2523},
year={2010}
}
-@article{xu2004energy,
- title={On an energy minimizing basis for algebraic multigrid methods},
- author={Xu, J. and Zikatanov, L.},
- journal={Computing and Visualization in Science},
- volume={7},
- number={3},
- pages={121--127},
- year={2004},
- publisher={Springer}
-}
-@article{vanek1996algebraic,
- title={Algebraic multigrid by smoothed aggregation for second and fourth order elliptic problems},
- author={Van{\v{e}}k, P. and Mandel, J. and Brezina, M.},
- journal={Computing},
- volume={56},
- number={3},
- pages={179--196},
- year={1996},
- publisher={Springer}
-}
@article{ainsworth1999approximation,
title={The approximation theory for the $p$-version finite element method and application to non-linear elliptic {PDE}s},
author={Ainsworth, M. and Kay, D.},
@@ -7689,7 +7703,7 @@ @article{brandt1977multi
@article{brandt1983complementarity,
title={Multigrid algorithms for the solution of linear complementarity problems arising from free boundary problems},
author={Brandt, A. and Cryer, C.W.},
- journal={SIAM journal on scientific and statistical computing},
+ journal={SIAM Journal on Scientific and Statistical Computing},
volume={4},
number={4},
pages={655--684},
@@ -8168,7 +8182,7 @@ @article{ahn2007multi
publisher={Elsevier}
}
@article{kucharik2010comparative,
- title={A comparative study of interface reconstruction methods for multi-material ALE simulations},
+ title={A comparative study of interface reconstruction methods for multi-material {ALE} simulations},
author={Kucharik, M. and Garimella, R.V. and Schofield, S.P. and Shashkov, M.J.},
journal={Journal of Computational Physics},
volume={229},
@@ -8177,6 +8191,16 @@ @article{kucharik2010comparative
year={2010},
publisher={Elsevier}
}
+@article{schofield2010multimaterial,
+ title={Multi-material incompressible flow simulation using the moment-of-fluid method},
+ author={Schofield, Samuel P and Christon, Mark A and Dyadechko, Vadim and Garimella, Rao V and Lowrie, Robert B and Swartz, Blair K},
+ journal={International Journal for Numerical Methods in Fluids},
+ volume={63},
+ number={8},
+ pages={931--952},
+ year={2010},
+ publisher={Wiley Online Library}
+}
@article{berger2005analysis,
title={Analysis of slope limiters on irregular grids},
author={Marsha Berger and Michael J Aftosmis and Scott M Murman},
@@ -8269,6 +8293,26 @@ @article{vandewalle1995fourier
year={1995},
publisher={Springer}
}
+@article{horton1995polylog,
+ title={An algorithm with polylog parallel complexity for solving parabolic partial differential equations},
+ author={Horton, Graham and Vandewalle, Stefan and Worley, P},
+ journal={SIAM Journal on Scientific Computing},
+ volume={16},
+ number={3},
+ pages={531--541},
+ year={1995},
+ publisher={SIAM}
+}
+@article{horton1995spacetime,
+ title={A space-time multigrid method for parabolic partial differential equations},
+ author={Horton, Graham and Vandewalle, Stefan},
+ journal={SIAM Journal on Scientific Computing},
+ volume={16},
+ number={4},
+ pages={848--864},
+ year={1995},
+ publisher={SIAM}
+}
@article{hackbusch1984parabolic,
title={Parabolic multi-grid methods},
author={Hackbusch, Wolfgang},
@@ -8299,6 +8343,12 @@ @article{brandt1991parabolic
pages={143--154},
year={1991}
}
+@phdthesis{greenwald1992parabolic,
+ title={Multigrid Techniques for Parabolic Problems},
+ author={J. C. Greenwald},
+ institute={Weizmann Institute of Science},
+ year=1992
+}
@article{emmett2012toward,
title={Toward an efficient parallel in time method for partial differential equations},
author={Emmett, Matthew and Minion, Michael},
@@ -8318,6 +8368,29 @@ @article{gander2007analysis
year={2007},
publisher={SIAM}
}
+@incollection{gander2007superlinear,
+ title={On the superlinear and linear convergence of the parareal algorithm},
+ author={Gander, Martin J. and Vandewalle, Stefan},
+ booktitle={Domain decomposition methods in science and engineering XVI},
+ pages={291--298},
+ year={2007},
+ publisher={Springer}
+}
+@article{gander2008hyperbolic,
+ title={Analysis of the parareal algorithm applied to hyperbolic problems using characteristics},
+ author={Gander, Martin J},
+ journal={Bolet{\'\i}n SEMA},
+ number={42},
+ year={2008}
+}
+@incollection{gander2008nonlinear,
+ title={Nonlinear convergence analysis for the parareal algorithm},
+ author={Gander, Martin J. and Hairer, Ernst},
+ booktitle={Domain Decomposition Methods in Science and Engineering XVII},
+ pages={45--56},
+ year={2008},
+ publisher={Springer}
+}
@article{dutt2000spectral,
title={Spectral deferred correction methods for ordinary differential equations},
author={Dutt, Alok and Greengard, Leslie and Rokhlin, Vladimir},
@@ -8364,6 +8437,24 @@ @article{diskin2005quantitative
year={2005},
publisher={SIAM}
}
+@article{diskin2010comparison,
+ title={Comparison of node-centered and cell-centered unstructured finite-volume discretizations: Viscous fluxes},
+ author={Diskin, Boris and Thomas, James L and Nielsen, Eric J and Nishikawa, Hiroaki and White, Jeffery A},
+ journal={AIAA journal},
+ volume={48},
+ number={7},
+ pages={1326--1338},
+ year={2010}
+}
+@article{diskin2011comparison,
+ title={Comparison of node-centered and cell-centered unstructured finite-volume discretizations: inviscid fluxes},
+ author={Diskin, Boris and Thomas, James L},
+ journal={AIAA journal},
+ volume={49},
+ number={4},
+ pages={836--854},
+ year={2011}
+}
@article{brandt1993accelerated,
title={Accelerated multigrid convergence and high-{R}eynolds recirculating flows},
author={Brandt, Achi and Yavneh, Irad},
@@ -8390,3 +8481,519 @@ @misc{brandt1981multigrid
year={1981},
publisher={The Weizmann Institute of Science, Rehovot, Israel}
}
+@article{spillane2011abstract,
+ title={Abstract robust coarse spaces for systems of PDEs via generalized eigenproblems in the overlaps},
+ author={Spillane, N and Dolean, V and Hauret, P and Nataf, F and Pechstein, C and Scheichl, R},
+ journal={NuMa-Report},
+ volume={7},
+ pages={2007},
+ year={2011}
+}
+@article{pattyn2013marine,
+ title={Why marine ice-sheet model predictions may diverge in estimating future sea-level rise},
+ author={Pattyn, Frank and Durand, Ga{\"e}l},
+ journal={Geophysical Research Letters},
+ year={2013},
+ publisher={Wiley Online Library}
+}
+@article{turk2013scale,
+ title={How to Scale a Code in the Human Dimension},
+ author={Turk, Matthew J.},
+ journal={arXiv preprint arXiv:1301.7064},
+ year={2013}
+}
+@article{knepley2013unified,
+ title={Achieving High Performance with Unified Residual Evaluation},
+ author={Matthew G. Knepley and Jed Brown and Karl Rupp and Barry F. Smith},
+ journal={arXiv preprint arXiv:1309.1204},
+ year={2013}
+}
+@article{knepley2013citations,
+ title={Accurately Citing Software and Algorithms Used in Publications},
+ author={Matthew G. Knepley and Jed Brown and Lois Curfman McInnes and Barry F. Smith},
+ journal={figshare preprint \url{http://dx.doi.org/10.6084/m9.figshare.785731}},
+ year={2013}
+}
+@article{brown2013runtime,
+ title={Run-time extensibility: anything less is unsustainable},
+ author={Jed Brown, Matthew G. Knepley, Barry F. Smith},
+ journal={figshare preprint \url{http://dx.doi.org/10.6084/m9.figshare.791571}},
+ year={2013}
+}
+@inproceedings{brown2013dimension,
+ title={Vectorization, communication aggregation, and reuse in stochastic and temporal dimensions},
+ author={Jed Brown},
+ booktitle={Exascale Mathematics Workshop, Aug 21--22, Washington, DC},
+ year={2013},
+ organization={DOE Office of Advanced Scientific Computing Research}
+}
+@inproceedings{adams2013lowcomm,
+ title={Low-communication techniques for extreme-scale multilevel solvers},
+ author={Mark F. Adams and Jed Brown and Matt Knepley},
+ booktitle={Exascale Mathematics Workshop, Aug 21--22, Washington, DC},
+ year={2013},
+ organization={DOE Office of Advanced Scientific Computing Research}
+}
+@techreport{arrigo2013earthcube,
+ title={{EarthCube} Modeling Workshop Results},
+ author={Jennifer Arrigo and Jed Brown and Louise Kellogg and Lorraine Hwang and Scott Peckham and David Tarboton},
+ institution={Computational Infrastructure for Geodynamics},
+ url={http://geodynamics.org/cig/community/workshops/Earthcube13/ExecSummary},
+ year={2013}
+}
+@article{may2013scalable,
+ title={A scalable matrix-free {S}tokes discretization for geodynamic applications},
+ author={David A. May and Jed Brown and Laetitia Le Pourhiet},
+ journal={\emph{submitted}},
+ year={2013}
+}
+@inproceedings{bui2012extreme,
+ title={Extreme-scale UQ for Bayesian inverse problems governed by PDEs},
+ author={Bui-Thanh, Tan and Burstedde, Carsten and Ghattas, Omar and Martin, James and Stadler, Georg and Wilcox, Lucas C},
+ booktitle={Proceedings of the International Conference on High Performance Computing, Networking, Storage and Analysis},
+ pages={3},
+ year={2012},
+ organization={IEEE Computer Society Press}
+}
+@inproceedings{nishikawa2010development,
+ title={Development and application of agglomerated multigrid methods for complex geometries},
+ author={Nishikawa, Hiroaki and Diskin, Boris and Thomas, James L},
+ booktitle={40th Fluid Dynamics Conference and Exhibit},
+ note={AIAA-2010-4731},
+ year={2010}
+}
+@article{brune2013unstructured,
+ title={Unstructured geometric multigrid in two and three dimensions on complex and graded meshes},
+ author={Brune, Peter R and Knepley, Matthew G and Scott, L Ridgway},
+ journal={SIAM Journal on Scientific Computing},
+ volume={35},
+ number={1},
+ pages={A173--A191},
+ year={2013},
+ publisher={SIAM}
+}
+@article{falgout2004generalizing,
+ title={On generalizing the algebraic multigrid framework},
+ author={Falgout, Robert D and Vassilevski, Panayot S},
+ journal={SIAM Journal on Numerical Analysis},
+ volume={42},
+ number={4},
+ pages={1669--1693},
+ year={2004},
+ publisher={SIAM}
+}
+@article{ron2011relaxation,
+ title={Relaxation-based coarsening and multiscale graph organization},
+ author={Ron, Dorit and Safro, Ilya and Brandt, Achi},
+ journal={Multiscale Modeling \& Simulation},
+ volume={9},
+ number={1},
+ pages={407--423},
+ year={2011},
+ publisher={SIAM}
+}
+@article{morano1998coarsening,
+ title={Coarsening strategies for unstructured multigrid techniques with application to anisotropic problems},
+ author={Morano, E. and Mavriplis, D.J. and Venkatakrishnan, V.},
+ journal={SIAM Journal on Scientific Computing},
+ volume={20},
+ number={2},
+ pages={393--415},
+ year={1998},
+ publisher={SIAM}
+}
+@article{brezina2001algebraic,
+ title={Algebraic multigrid based on element interpolation (AMGe)},
+ author={Brezina, Marian and Cleary, Andy J and Falgout, Rob D and Henson, VE and Jones, JE and Manteuffel, TA and McCormick, SF and Ruge, JW},
+ journal={SIAM Journal on Scientific Computing},
+ volume={22},
+ number={5},
+ pages={1570--1592},
+ year={2001},
+ publisher={SIAM}
+}
+@article{bell2012exposing,
+ title={Exposing fine-grained parallelism in algebraic multigrid methods},
+ author={Bell, Nathan and Dalton, Steven and Olson, Luke N},
+ journal={SIAM Journal on Scientific Computing},
+ volume={34},
+ number={4},
+ pages={C123--C152},
+ year={2012},
+ publisher={SIAM}
+}
+@article{jameson2003amr,
+ title={AMR vs high order schemes},
+ author={Jameson, Leland},
+ journal={Journal of scientific computing},
+ volume={18},
+ number={1},
+ pages={1--24},
+ year={2003},
+ publisher={Springer}
+}
+@unpublished{may2011tightly,
+ author={Dave A. May and Laetitia Le Pourhiet and Jed Brown},
+ title={Tightly coupled geodynamic systems: Software, implicit solvers, and applications},
+ note={American Geophysical Union Fall Meeting},
+ year=2011
+}
+@phdthesis{andreev2012stability,
+ title={Stability of space-time {P}etrov-{G}alerkin discretizations for parabolic evolution equations},
+ author={Andreev, Roman},
+ year={2012},
+ school={Diss., Eidgen{\"o}ssische Technische Hochschule ETH Z{\"u}rich, Nr. 20842, 2012}
+}
+@article{andreev2013stability,
+ title={Stability of sparse space-time finite element discretizations of linear parabolic evolution equations},
+ author={Andreev, Roman},
+ journal={IMA Journal of Numerical Analysis},
+ volume={33},
+ number={1},
+ pages={242--260},
+ year={2013},
+ publisher={Oxford University Press}
+}
+@article{smith1991domain,
+ title={A domain decomposition algorithm for elliptic problems in three dimensions},
+ author={Smith, Barry F},
+ journal={Numerische Mathematik},
+ volume={60},
+ number={1},
+ pages={219--234},
+ year={1991},
+ publisher={Springer}
+}
+@article{pavarino1999iterative,
+ title={Iterative substructuring methods for spectral element discretizations of elliptic systems {I}: {C}ompressible linear elasticity},
+ author={Pavarino, Luca F and Widlund, Olof B},
+ journal={SIAM Journal on Numerical Analysis},
+ volume={37},
+ number={2},
+ pages={353--374},
+ year={1999},
+ publisher={SIAM}
+}
+@article{hager2009nonlinear,
+ title={Nonlinear complementarity functions for plasticity problems with frictional contact},
+ author={Hager, Corinna and Wohlmuth, B.I.},
+ journal={Computer Methods in Applied Mechanics and Engineering},
+ volume={198},
+ number={41},
+ pages={3411--3427},
+ year={2009},
+ publisher={Elsevier}
+}
+@article{bridges2012fault,
+ author = {Patrick G. Bridges and
+ Kurt B. Ferreira and
+ Michael A. Heroux and
+ Mark Hoemmen},
+ title = {Fault-tolerant linear solvers via selective reliability},
+ journal = {CoRR},
+ volume = {abs/1206.1390},
+ year = {2012},
+ ee = {http://arxiv.org/abs/1206.1390},
+ bibsource = {DBLP, http://dblp.uni-trier.de}
+}
+@techreport{sullivan2011containment,
+ author = { Michael Sullivan and Doe Hyun Yoon and Mattan Erez },
+ title = { Containment Domains: A Full-System Approach to Computational Resiliency },
+ number = { TR-LPH-2011-001 },
+ institution = { LPH Group, Dept. of Electrical and Computer Engineering, The University of Texas at Austin },
+ month = { January },
+ year = { 2011 },
+ mycat = { report },
+}
+@article{mishra2003algorithm,
+ title={An algorithm-based error detection scheme for the multigrid method},
+ author={Mishra, Amitabh and Banerjee, Prithviraj},
+ journal={IEEE Transactions on Computers},
+ volume={52},
+ number={9},
+ pages={1089--1099},
+ year={2003},
+ publisher={IEEE}
+}
+@techreport{saws-manual,
+ author={Matthew Otten and Jed Brown and Barry Smith},
+ title={Sciencific {A}pplication (W)eb server Users Manual},
+ year=2013,
+ institution={Argonne National Laboratory}
+}
+@incollection{safro2012advanced,
+ title={Advanced coarsening schemes for graph partitioning},
+ author={Safro, Ilya and Sanders, Peter and Schulz, Christian},
+ booktitle={Experimental Algorithms},
+ pages={369--380},
+ year={2012},
+ publisher={Springer}
+}
+@article{hargrove2006blcr,
+ author = "Paul H Hargrove and Jason C Duell",
+ title = "Berkeley lab checkpoint/restart {(BLCR)} for {Linux} clusters",
+ journal = "Journal of Physics: Conference Series",
+ volume = "46",
+ number = "1",
+ pages = "494",
+ url = "http://stacks.iop.org/1742-6596/46/i=1/a=067",
+ year = "2006"
+}
+@inproceedings{jolivet2013scalabledd,
+ title={Scalable domain decomposition preconditioners for heterogeneous elliptic problems},
+ author={Jolivet, Pierre and Hecht, Fr{\'e}d{\'e}ric and Nataf, Fr{\'e}d{\'e}ric and Prud'homme, Christophe},
+ booktitle={Proceedings of SC13: International Conference for High Performance Computing, Networking, Storage and Analysis},
+ pages={80},
+ year={2013},
+ organization={ACM}
+}
+@article{ernst2010stochastic,
+ title={Stochastic {G}alerkin matrices},
+ author={Ernst, Oliver G. and Ullmann, Elisabeth},
+ journal={SIAM Journal on Matrix Analysis and Applications},
+ volume={31},
+ number={4},
+ pages={1848--1872},
+ year={2010},
+ publisher={SIAM}
+}
+@incollection{krause2008multiscale,
+ title={On the multiscale solution of constrained minimization problems},
+ author={Krause, Rolf},
+ booktitle={Domain Decomposition Methods in Science and Engineering XVII},
+ pages={93--104},
+ year={2008},
+ publisher={Springer}
+}
+@incollection{cai2009nonlinear,
+ title={Nonlinear overlapping domain decomposition methods},
+ author={Cai, Xiao-Chuan},
+ booktitle={Domain Decomposition Methods in Science and Engineering XVIII},
+ pages={217--224},
+ year={2009},
+ publisher={Springer}
+}
+@article{hwang2007class,
+ title={A class of parallel two-level nonlinear {S}chwarz preconditioned inexact {N}ewton algorithms},
+ author={Hwang, Feng-Nan and Cai, Xiao-Chuan},
+ journal={Computer methods in applied mechanics and engineering},
+ volume={196},
+ number={8},
+ pages={1603--1611},
+ year={2007},
+ publisher={Elsevier}
+}
+@article{guo2013parallel,
+ title = "A parallel, fully coupled, fully implicit solution to reactive transport in porous media using the preconditioned {J}acobian-{F}ree {N}ewton-{K}rylov Method ",
+ journal = "Advances in Water Resources ",
+ volume = "53",
+ number = "0",
+ pages = "101 - 108",
+ year = "2013",
+ note = "",
+ issn = "0309-1708",
+ doi = "http://dx.doi.org/10.1016/j.advwatres.2012.10.010",
+ url = "http://www.sciencedirect.com/science/article/pii/S0309170812002722",
+ author = "Luanjing Guo and Hai Huang and Derek R. Gaston and Cody J. Permann and David Andrs and George D. Redden and Chuan Lu and Don T. Fox and Yoshiko Fujita",
+ keywords = "Reactive transport",
+ keywords = "Jacobian-Free Newton-Krylov",
+ keywords = "Physics-based block preconditioner "
+}
+@article{williamson2012multidimensional,
+ title={Multidimensional multiphysics simulation of nuclear fuel behavior},
+ author={Williamson, R.L. and Hales, J.D. and Novascone, S.R. and Tonks, M.R. and Gaston, D.R. and Permann, C.J. and Andrs, D. and Martineau, R.C.},
+ journal={Journal of Nuclear Materials},
+ volume={423},
+ number={1},
+ pages={149--163},
+ year={2012},
+ publisher={Elsevier}
+}
+@article{hales2012solving,
+ title={Solving Nonlinear Solid Mechanics Problems with the {J}acobian-{F}ree {N}ewton {K}rylov Method},
+ author={Hales, J.D. and Novascone, S.R. and Williamson, R.L. and Gaston, D.R. and Tonks, M.R.},
+ journal={Computer Modeling in Engineering \& Sciences(CMES)},
+ volume={84},
+ number={2},
+ pages={123--153},
+ year={2012},
+ publisher={Tech Science Press}
+}
+@article{dennis2012computational,
+ title={Computational performance of ultra-high-resolution capability in the Community Earth System Model},
+ author={Dennis, John M and Vertenstein, Mariana and Worley, Patrick H and Mirin, Arthur A and Craig, Anthony P and Jacob, Robert and Mickelson, Sheri},
+ journal={International Journal of High Performance Computing Applications},
+ volume={26},
+ number={1},
+ pages={5--16},
+ year={2012},
+ publisher={SAGE Publications}
+}
+@article{wienands2009collocation,
+ title={Collocation coarse approximation in multigrid},
+ author={Wienands, Roman and Yavneh, Irad},
+ journal={SIAM Journal on Scientific Computing},
+ volume={31},
+ number={5},
+ pages={3643--3660},
+ year={2009},
+ publisher={SIAM}
+}
+@article{sala2008petrov,
+ title={A new {P}etrov-{G}alerkin smoothed aggregation preconditioner for nonsymmetric linear systems},
+ author={Sala, Marzio and Tuminaro, Raymond S},
+ journal={SIAM Journal on Scientific Computing},
+ volume={31},
+ number={1},
+ pages={143--166},
+ year={2008},
+ publisher={SIAM}
+}
+@incollection{baker2012scaling,
+ title={Scaling algebraic multigrid solvers: {O}n the road to exascale},
+ author={Baker, Allison H. and Falgout, Robert D. and Gamblin, Todd and Kolev, Tzanio V. and Schulz, Martin and Yang, Ulrike Meier},
+ booktitle={Competence in High Performance Computing 2010},
+ pages={215--226},
+ year={2012},
+ publisher={Springer}
+}
+@article{cappello2009fault,
+ title={Fault tolerance in petascale/exascale systems: {C}urrent knowledge, challenges and research opportunities},
+ author={Cappello, Franck},
+ journal={International Journal of High Performance Computing Applications},
+ volume={23},
+ number={3},
+ pages={212--226},
+ year={2009},
+ publisher={Sage Publications}
+}
+@article{falgout2013nongalerkin,
+ title={Non-{G}alerkin Coarse Grids for Algebraic Multigrid},
+ author={Robert D. Falgout and Jacob B. Schroder},
+ journal={\emph{submitted}},
+ year=2013
+}
+@article{brezina2006adaptive,
+ title={Adaptive algebraic multigrid},
+ author={Brezina, Marian and Falgout, R and MacLachlan, Scott and Manteuffel, T and McCormick, S and Ruge, John},
+ journal={SIAM Journal on Scientific Computing},
+ volume={27},
+ number={4},
+ pages={1261--1286},
+ year={2006},
+ publisher={SIAM}
+}
+@article{brandt2000general,
+ title={General highly accurate algebraic coarsening},
+ author={Brandt, Achi},
+ journal={Electronic Transactions on Numerical Analysis},
+ volume={10},
+ number={1},
+ pages={1--20},
+ year={2000}
+}
+@article{brezina2004adaptive,
+ title={Adaptive smoothed aggregation ($\alpha$ SA)},
+ author={Brezina, M and Falgout, R and MacLachlan, S and Manteuffel, T and McCormick, S and Ruge, J},
+ journal={SIAM Journal on Scientific Computing},
+ volume={25},
+ number={6},
+ pages={1896--1920},
+ year={2004},
+ publisher={SIAM}
+}
+@inproceedings{dobrev2013discretization,
+ title={Scalable multi-physics simulations will require new discretization and numerical methods research},
+ author={Veselin Dobrev and Tzanio Kolev and Robert Rieben and Bert Still},
+ booktitle={Proceedings of the ASCR Exascale Mathematics Research Conference},
+ year={2013}
+}
+@article{ozbench2008model,
+ title={A model comparison study of large-scale mantle-lithosphere dynamics driven by subduction},
+ author={OzBench, Mark and Regenauer-Lieb, Klaus and Stegman, Dave R and Morra, Gabriele and Farrington, Rebecca and Hale, Alina and May, Dave A and Freeman, Justin and Bourgouin, Laurent and M{\"u}hlhaus, Hans and others},
+ journal={Physics of the Earth and Planetary Interiors},
+ volume={171},
+ number={1},
+ pages={224--234},
+ year={2008},
+ publisher={Elsevier}
+}
+@article{branlund2001weak,
+ title={Weak zone formation for initiating subduction from thermo-mechanical feedback of low-temperature plasticity},
+ author={Branlund, JM and Regenauer-Lieb, K and Yuen, DA},
+ journal={Earth and Planetary Science Letters},
+ volume={190},
+ number={3},
+ pages={237--250},
+ year={2001},
+ publisher={Elsevier}
+}
+@article{kameyama1999thermal,
+ title={Thermal-mechanical effects of low-temperature plasticity (the Peierls mechanism) on the deformation of a viscoelastic shear zone},
+ author={Kameyama, Masanori and Yuen, David A and Karato, Shun-Ichiro},
+ journal={Earth and Planetary Science Letters},
+ volume={168},
+ number={1},
+ pages={159--172},
+ year={1999},
+ publisher={Elsevier}
+}
+@article{kaus2006initiation,
+ title={Initiation of localized shear zones in viscoelastoplastic rocks},
+ author={Kaus, Boris JP and Podladchikov, Yuri Y},
+ journal={Journal of Geophysical Research: Solid Earth (1978--2012)},
+ volume={111},
+ number={B4},
+ year={2006},
+ publisher={Wiley Online Library}
+}
+@article{berger2012inexact,
+ title={Inexact {S}chwarz-algebraic multigrid preconditioners for crack problems modeled by extended finite element methods},
+ author={Berger-Vergiat, Luc and Waisman, Haim and Hiriyur, Badri and Tuminaro, Ray and Keyes, David},
+ journal={International Journal for Numerical Methods in Engineering},
+ volume={90},
+ number={3},
+ pages={311--328},
+ year={2012},
+ publisher={Wiley Online Library}
+}
+@article{hiriyur2012quasi,
+ title={A quasi-algebraic multigrid approach to fracture problems based on extended finite elements},
+ author={Hiriyur, Badri and Tuminaro, Ray S and Waisman, Haim and Boman, Erik G and Keyes, David E},
+ journal={SIAM Journal on Scientific Computing},
+ volume={34},
+ number={2},
+ pages={A603--A626},
+ year={2012},
+ publisher={SIAM}
+}
+@article{brown2010toward,
+ title={Toward energy-efficient computing},
+ author={Brown, David J and Reams, Charles},
+ journal={Communications of the ACM},
+ volume={53},
+ number={3},
+ pages={50--58},
+ year={2010},
+ publisher={ACM}
+}
+@article{hibler2000modeling,
+ title={On modeling the anisotropic failure and flow of flawed sea ice},
+ author={Hibler, W.D. and Schulson, Erland M.},
+ journal={Journal of Geophysical Research: Oceans (1978--2012)},
+ volume={105},
+ number={C7},
+ pages={17105--17120},
+ year={2000},
+ publisher={Wiley Online Library}
+}
+@article{zhang1997efficient,
+ title={On an efficient numerical method for modeling sea ice dynamics},
+ author={Zhang, Jinlun and Hibler III, W.D.},
+ journal={Journal of Geophysical Research},
+ volume={102},
+ number={C4},
+ pages={8691--8702},
+ year={1997},
+ publisher={American Geophysical Union}
+}

0 comments on commit 81e15fa

Please sign in to comment.
Something went wrong with that request. Please try again.