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@samtools @wormtable @mcveanlab @conda-forge @bioconda @zarr-developers @tskit-dev @popsim-consortium

Popular repositories

  1. A demo of the Python C API for CodeMonkeys

    C 16 2

  2. Comparisons of simulators for the msprime paper

    TeX 5 3

  3. Efficient coalescent simulations in a spatial continuum

    C 4 1

  4. Coalescent simulations in continuous space

    C 2

  5. Forked from ga4gh/ga4gh-server

    A reference implementation of the APIs defined in the schemas repository.

    Python 1 1

  6. A tester for the htsget API.

    Python 1 2

2,018 contributions in the last year

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Contribution activity

September 2020

Created a pull request in tskit-dev/msprime that received 12 comments

Proposal for bug_assert macro

Recent discussions with @castedo have highlighted that the current usage of assert in the msprime code is problematic (#1192). Here's a proposal fo…

+203 −190 12 comments

Created an issue in tskit-dev/tskit that received 18 comments

Add pedigree data to individual table.

Working on the (not ready for use) pedigree simulation in msprime, I realised that adding pedigree data into the tskit data model would be pretty s…


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