@jfnavarro jfnavarro released this Apr 19, 2018 · 16 commits to master since this release

Assets 4

(Binaries generated for R 3.4.4 and BioConductor 3.6)

  • Fixed bugs
  • Bumped SCRAN to newest version

@jfnavarro jfnavarro released this Feb 9, 2018 · 50 commits to master since this release

Assets 4
* Removed the online support
* Datasets are now loaded manually in different ways
* Added support to include a file with spot coordinates in the dataset
* Added support to include a file with spike-ins in the dataset
* Added support to include a file with normalization factors in the dataset
* Added support to adjust the chip size in the dataset
* Datasets are now working with the latest matrix TSV format
* If no spot coordinates are given the alignment matrix will be computed automatically
* Added a view with the spots to allow: select, show, hide, color, etc...
* Added the total count for the Genes and Spots view
* Added widget to show QC stats
* Added option to load gene colors
* Added option to load spot colors
* Added option to perform clustering on a dataset
* Added option to select based on the clustered spots
* Added lasso selection
* Added option to export/import selections
* Selections are now sub-matrices of a dataset
* Added widget to compute correlation between 2 selections
* Added widget to compute DEA (Differential Expression Analysis) between 2 selections
* Bug fixes and improvements
* UI optimizations
* Speed improvements
* Removed deprecated stuff