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@qfo @etetoolkit @TreeViz @eggnogdb @compgenomicslab


  1. Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the …

    Python 497 163

  2. Fast genome-wide functional annotation through orthology assignment

    Python 242 74

  3. Raw data and scripts used to benchmark eggnog-mapper. Analysis and additional tests cases are provided as a python notebook.

    Jupyter Notebook 13 3

  4. Search flexible patterns within tree structures using regular expression like syntax.

    Python 7 11

  5. Additional test cases of branch support rearrangements after tree re-rooting inspired by (APE, dendropy, biopython, ete3, newick-utilities, bioperl)

    R 2 1

111 contributions in the last year

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Activity overview
Contributed to etetoolkit/course, etetoolkit/ete, jhcepas/discoreg and 5 other repositories

Contribution activity

January 2021

jhcepas has no activity yet for this period.

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