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  • EMBL
  • Heidelberg, Germany

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@qfo @etetoolkit @TreeViz

Pinned repositories

  1. etetoolkit/ete

    Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the …

    Python 233 80

  2. eggnog-mapper

    Fast genome-wide functional annotation through orthology assignment

    Python 33 13

  3. emapper-benchmark

    Raw data and scripts used to benchmark eggnog-mapper. Analysis and additional tests cases are provided as a python notebook.

    Jupyter Notebook 1

  4. etetoolkit/treematcher

    Search flexible patterns within tree structures using regular expression like syntax.

    Python 5 9

  5. test_branch_support_after_tree_rerooting

    Additional test cases of branch support rearrangements after tree re-rooting inspired by http://biorxiv.org/content/early/2015/12/25/035360 (APE, dendropy, biopython, ete3, newick-utilities, bioperl)

    R 1

190 contributions in the last year

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep Mon Wed Fri

Contribution activity First pull request First issue First repository Joined GitHub

September 2017

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