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  1. Scaffolding using Integer Linear Programming

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  2. A tool for working with gene feature files, and SAM files.

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  3. A collection of code used in analyzing and organizing high throughput DNA sequencing data.

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  4. whole genome scaffolding

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  5. Parallelization code for common easily parallelized bioinformatics tools

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  6. A small application to facilitate markup of multi-channel images

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August 2020

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