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Keras implementation of a Variational Auto Encoder with a Concrete Latent Distribution

Python 46 18 Updated Sep 21, 2017

Draw UpSet plots with Matplotlib

Python 96 23 Updated Jul 27, 2020

This version of the MatchEngine is deprecated and no longer supported. Please see https://github.com/dfci/matchengine-V2

Python 15 9 Updated Dec 10, 2019

A platform for matching patient-specific genomic profiles to precision cancer medicine clinical trials

JavaScript 5 8 Updated Feb 18, 2020

A platform for matching patient-specific genomic profiles to precision cancer medicine clinical trials

Python 9 7 Updated Feb 17, 2020

An R package to extract spatial features based on multiplex IF images

R 2 1 Updated Apr 4, 2019

Convolutional neural network analysis for predicting DNA sequence activity.

Jupyter Notebook 195 85 Updated May 2, 2020

Open-source JavaScript charting library behind Plotly and Dash

JavaScript 12,050 1,423 Updated Aug 6, 2020

cBioPortal for Cancer Genomics

JavaScript 333 272 Updated Aug 5, 2020

Parallelization code for common easily parallelized bioinformatics tools

Python 1 Updated Dec 16, 2013

Scaffolding using Integer Linear Programming

C++ 2 1 Updated May 5, 2014

A Swagger spec extractor for flask-restful

JavaScript 615 199 Updated May 31, 2020

whole genome scaffolding

Python 1 Updated Mar 23, 2012

A collection of code used in analyzing and organizing high throughput DNA sequencing data.

Python 1 Updated Jul 12, 2010

A tool for working with gene feature files, and SAM files.

1 Created Jun 29, 2010
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