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Ruby library for representing RNA secondary structures as tree data structures. (Unmaintained.)
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RNASec

RNASec is a library for representing RNA secondary structures as tree data structures.

Usage

To “evolve back'' to the MBE1A tree, execute

$ bin/ga -d data/mbe1a.ct

For available options, execute

$ bin/ga -h

Requirements

Ruby 1.9 is required. If you wish to run unit tests, you will need to follow these steps:

# Install `bundler':
$ gem install bundler

# Install all dependencies:
$ bundle install

Then you can test and develop:

# Run tests:
$ rake test

# Documentation:
$ rake yard

# Coverage/stats:
$ rake rcov

Author

Jon-Michael Deldin <jon-michael.deldin@umontana.edu>

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