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agaor edited this page Feb 6, 2017 · 11 revisions

VISMapper is an interactive web tool to manage sequencing data for the detection of viral insertion sites in gene therapy experiments. VISMapper carries out a fast mapping of the reads and present them in the context of the genome in a few seconds. Distinct context-specific information on the mapping sites, known cancer genes in the neighbourhood,... are provided both in graphical and tabular modes.

The web application is freely accessible at

User Guide

This guide teaches you how to use the VISMapper web application through the following sections:

  • Getting Started: it describes briefly the application structure.
  • Upload And Run: it explains how to upload your experimental data and run the application.
  • Project Dashboard: it describes how to visualize your data.
  • Report: it details the generated text report.
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