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README.md

The nsPCE toolbox

Methods for constructing non-smooth polynomial chaos expansion (nsPCE) surrogate models.

Codes for the nsPCE framework, applicable to non-smooth ODE models and particularly for dynamic flux balance analysis (DFBA) models, as presented in the paper:

@article{paulson19, title={Fast uncertainty quantification of dynamic flux balance analysis models using non-smooth polynomial chaos expansions}, author={J. A. Paulson and M. Martin-Casas and A. Mesbah}, journal={PLoS Computational Biology}, pages={under review}, year={2019} }

Note that UQLab (https://www.uqlab.com/) and a DFBA integrator (e.g., https://yoric.mit.edu/software/dfbalab/how-obtain-dfbalab) must be installed in order for this code to run properly.

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