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@SciLifeLab @Molmed @NationalGenomicsInfrastructure

Pinned repositories

  1. twitter/algebird

    Abstract Algebra for Scala

    Scala 1.8k 275

  2. broadgsa/gatk

    Official code repository for GATK versions 1.0 through 3.7 (core engine). For GATK 4 code, see the repository

    Java 262 205

  3. piper

    A genomics pipeline build on top of the GATK Queue framework. Main repository: (make sure you fork from there)

    Scala 22 25

  4. ansible_spark_openstack

    Instructions and Ansible playbooks for deploying a Spark stand-alone cluster on OpenStack

    Python 7 9

  5. awesome-10x-genomics

    List of tools and resources related to the 10x Genomics GEMCode/Chromium system

    63 11

  6. Molmed/checkQC

    CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria

    Python 19 8

437 contributions in the last year

Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Mon Wed Fri
Activity overview
Contributed to Molmed/checkQC, johandahlberg/arteria-incubation, rdci-project/rdci and 5 other repositories

Contribution activity

November 2018

Created a pull request in Molmed/checkQC that received 2 comments

Finish UnidentifiedIndexHandler

Finished the UnidentifiedIndexHandler. Added test, some docs, and all that jazz. Except for any further validation tests we want to do, I think tha…

+296 −107 2 comments

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