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  • Arctic Code Vault Contributor

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@SciLifeLab @Molmed @NationalGenomicsInfrastructure

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  1. Abstract Algebra for Scala

    Scala 2k 296

  2. Official code repository for GATK versions 1.0 through 3.7 (core engine). For GATK 4 code, see the https://github.com/broadinstitute/gatk repository

    Java 274 213

  3. A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (make sure you fork from there)

    Scala 22 26

  4. Instructions and Ansible playbooks for deploying a Spark stand-alone cluster on OpenStack

    Python 7 8

  5. List of tools and resources related to the 10x Genomics GEMCode/Chromium system

    84 13

  6. CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria

    Python 20 10

398 contributions in the last year

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Activity overview
Contributed to ctmrbio/claritylims, commonlims/commonlims, Molmed/seqreports and 5 other repositories
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Contribution activity

October 2020

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