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  1. ALPACA is a caller for genomic variants (single nucleotide and small indels) from next-generation sequencing data that uses a novel algebraic approach to incorporate sample based filtering into the…

    Rust 19 1

  2. Forked from seandavi/awesome-single-cell

    List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.


  3. Automatically exported from

    Java 3

  4. Forked from ewels/MultiQC

    Aggregate results from bioinformatics analyses across many samples into a single report.

    Python 2

  5. A test repo.

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  6. Forked from snakemake-workflows/dna-seq-gatk-variant-calling

    This Snakemake pipeline implements the GATK best-practices workflow

    HTML 1

2,330 contributions in the last year

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Contribution activity

January 2021

Created a pull request in snakemake/snakemake that received 2 comments

do not access jobid during checkpoint update

This is faster and simpler than always updating jobids during a checkpoint handling. The jobid update happens during postprocess at the end of the …

+1 −1 2 comments
Opened 7 other pull requests in 6 repositories
Reviewed 28 pull requests in 9 repositories
snakemake/snakemake 11 pull requests
rust-bio/rust-bio-tools 6 pull requests
rust-bio/rust-bio-types 4 pull requests
vembrane/vembrane 2 pull requests
snakemake/snakedeploy 1 pull request
bioconda/bioconda-recipes 1 pull request
snakemake/snakemake-wrappers 1 pull request
rust-bio/rust-bio 1 pull request
snakemake-workflows/dna-seq-varlociraptor 1 pull request

Created an issue in adumbidiot/lz-string-rs that received 3 comments

Can we get a new release on

Hi! We need the code in the master branch quite urgently, would you be so kind to release a new version on Thanks, Johannes

Opened 2 other issues in 1 repository
1 closed 1 open

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