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Pinned repositories

  1. PopPUNK

    PopPUNK 👨‍🎤 (POPulation Partitioning Using Nucleotide Kmers)

    Python 9 2

  2. mgalardini/pyseer

    SEER, reimplemented in python 🐍🔮

    Python 15 1

  3. tajima-D

    calculates tajima's D from bcftools query input

    C++ 1

  4. which_tree

    Testing of phylogenetic inference methods

    R 3 2

  5. seer

    sequence element (kmer) enrichment analysis

    C++ 21 8

476 contributions in the last year

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Contribution activity

January 2019

Created an issue in mgalardini/pyseer that received 1 comment

Saving non-numerical covariates with the elastic net

With a string as the covariates using --enet and --save-model: File "/nfs/users/nfs_j/jl11/installations/pyseer/pyseer-runner.py", line 8, in <modu…

1 comment

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