From 91e477d70a08f24e1743db04e4bf4bc4baa333ca Mon Sep 17 00:00:00 2001 From: jo Date: Fri, 25 Sep 2020 13:36:02 +0200 Subject: [PATCH] added emplate autotrophic medium for gapfilling - refers #41 --- dat/media/autotrophic.csv | 25 +++++++++++++++++++++++++ 1 file changed, 25 insertions(+) create mode 100644 dat/media/autotrophic.csv diff --git a/dat/media/autotrophic.csv b/dat/media/autotrophic.csv new file mode 100644 index 00000000..60d04eb1 --- /dev/null +++ b/dat/media/autotrophic.csv @@ -0,0 +1,25 @@ +"compounds","name","maxFlux" +"cpd00001","H2O",1000 +"cpd00011","CO2",50 +"cpd11640","H2",100 +"cpd00009","Phosphate",100 +"cpd00030","Mn2+",100 +"cpd00034","Zn2+",100 +"cpd00048","Sulfate",100 +"cpd00058","Cu2+",100 +"cpd00063","Ca2+",100 +"cpd00067","H+",0.1 +"cpd00099","Cl-",100 +"cpd00149","Co2+",100 +"cpd00205","K+",100 +"cpd00254","Mg",100 +"cpd00531","Hg2+",100 +"cpd00971","Na+",100 +"cpd01012","Cd2+",100 +"cpd01048","Arsenate",100 +"cpd10515","Fe2+",100 +"cpd10516","fe3",0.01 +"cpd11595","chromate",100 +"cpd00013","NH3",100 +"cpd11574","Molybdate",100 +"cpd00244","Ni2+",100