Code of the article: Rosindell, James, and Luke J. Harmon. "A unified model of species immigration, extinction and abundance on islands." 2013
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.gitignore
Dynamics_BI_1.cpp
Dynamics_BI_1.pro
Dynamics_CI_1.cpp
Dynamics_CI_1.pro
Dynamics_PI_1.cpp
Dynamics_PI_1.pro
LICENSE
README.md
RandomWrap.cpp
metacommunity_DLS3.txt
metacommunity_LS4.txt
readme.pdf

README.md

RosindellHarmon2013

Code of the article:

  • Rosindell, J., Harmon, L. J. (2013), A unified model of species immigration, extinction and abundance on islands. Journal of Biogeography, 40: 1107–1118. doi: 10.1111/jbi.12064

I made it to compile and run under Qt Creator.

Below is the PDF of the original authors converted to Markdown:

readme.pdf

This appendix includes the following files licensed under an MIT license. Full license information is available in the files themselves. Please refer to the paper when using the software and e­‐mail any enquiries to james@rosindell.org

Dynamics_BI_1.cpp

Edit, compile and run this code for simulations with basic immigration.

Dynamics_CI_1.cpp

Edit, compile and run this code for simulations with clustered immigration.

Dynamics_PI_1.cpp

Edit, compile and run this code for simulations with protracted immigration.

metacommunity_DLS3.txt

metacommunity_LS4.txt

These files give the metacommunity species abundances.You can change these for your own files or add your own files (editing the code appropriately).The code will not run unless these files or replacements are available in the same folder as the executable file.

RandomWrap.cpp

This is needed to compile the code - it includes a basic random number generator.It is recommended you read the comments and follow the instructions to upgrade the random number generator to a better one. Unfortunately the generator we use was not written by us so be cannot provide a copy under an MIT open source license.