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  1. IntroToStatisticalLearningR-

    Work on Introduction to Statistical Learning

    87 99

  2. SeqPrep

    Tool for stripping adaptors and/or merging paired reads with overlap into single reads.

    C 78 37

  3. SimSeq

    An illumina paired-end and mate-pair short read simulator. This project attempts to model as many of the quirks that exist in Illumina data as possible. Some of these quirks include the potential f…

    C 34 11

  4. KentLib

    Subset of the kent source libraries (perhaps out of date) that are easily built and installed on OSX and Linux. These libraries provide usefull utilities for bioinformatics programming in C. This m…

    C 12 3

  5. re-pair

    Program to re-do the pairing of fastq reads. This program is modified from http://code.google.com/p/ngopt/source/browse/trunk/tools/pair_reads/repair.cpp?r=85

    C++ 5 2

  6. Jellyfish

    Fork of the jellyfish kmer counter. Here is the description copied from their site: JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and…

    C++ 4 2

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Contribution activity First pull request First issue First repository Joined GitHub

May 2017

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