Extra tools and utilities for sga
Perl Shell
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README.md
build-dependencies.sh
download-dependencies.sh
sga-dbsnp-filter.pl
sga_freebayes_merge.pl
sga_generate_varcall_makefile.pl

README.md

This repository contains utilities for running SGA and processing the results.

It requires a number of dependencies to be downloaded and compiled. After cloning this repository, please run:

./download-dependencies.sh
./build-dependencies.sh