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Commits on Jun 29, 2012
  1. Made haplotype QC less strict

    authored
  2. Fixed compiler warning

    authored
Commits on Jun 27, 2012
Commits on Jun 21, 2012
Commits on Jun 19, 2012
Commits on Jun 15, 2012
Commits on Jun 14, 2012
  1. Use correct file status for popidx

    authored
  2. Use full path to indices

    authored
Commits on Jun 12, 2012
  1. Fixed homopolymer error when variant is in last column

    Cornelis Arnout Albers authored
Commits on Jun 11, 2012
  1. sga-merge uses the full path to the input files so they do not need t…

    authored
    …o be in the working directory
Commits on Jun 10, 2012
  1. Removed debug prints

    authored
Commits on May 31, 2012
  1. Added multisample EM caller.

    Cornelis Arnout Albers authored
Commits on May 24, 2012
  1. Added MultiSample EM and caller. Fixed homopolymer, added AmbiMap fil…

    Cornelis Arnout Albers authored
    …ter tag
Commits on May 23, 2012
Commits on May 22, 2012
Commits on May 21, 2012
Commits on May 16, 2012
Commits on May 10, 2012
  1. More option cleanup

    authored
  2. Cleaned up parameters

    authored
  3. The algorithm used during haplotype assembly (dbg vs string graph) is…

    authored
    … a command line option
  4. Moved HapgenUtil

    authored
  5. Removed old debug code

    authored
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