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Commits on Jul 20, 2012
  1. v0.9.3

    authored
  2. Merge branch 'graph-diff-refactor'

    authored
    Conflicts:
    	src/SGA/merge.cpp
Commits on Jul 18, 2012
Commits on Jul 17, 2012
Commits on Jul 8, 2012
Commits on Jul 4, 2012
  1. added new option to scaffold2fasta --write-names, which outputs the n…

    authored
    …ames of the contigs that make up the scaffold
Commits on Jul 2, 2012
  1. Fixed cluster extend --iterations option so it properly extends for N…

    authored
    … rounds, not to N reads
Commits on Jun 30, 2012
  1. Disable homopolymer filter

    authored
Commits on Jun 29, 2012
  1. Made haplotype QC less strict

    authored
  2. Fixed compiler warning

    authored
Commits on Jun 27, 2012
Commits on Jun 21, 2012
Commits on Jun 20, 2012
Commits on Jun 19, 2012
Commits on Jun 15, 2012
Commits on Jun 14, 2012
  1. Use correct file status for popidx

    authored
  2. Use full path to indices

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Commits on Jun 12, 2012
  1. Fixed homopolymer error when variant is in last column

    Cornelis Arnout Albers authored
Commits on Jun 11, 2012
  1. sga-merge uses the full path to the input files so they do not need t…

    authored
    …o be in the working directory
Commits on Jun 10, 2012
  1. Removed debug prints

    authored
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