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Commits on Aug 20, 2012
  1. v0.9.32

    jts committed Aug 20, 2012
Commits on Aug 16, 2012
Commits on Aug 15, 2012
  1. Removed print

    jts committed Aug 15, 2012
  2. Fixed DindelHaplotype::extractVariants() incorrect assertion

    Cornelis Arnout Albers committed Aug 15, 2012
  3. Merge branch 'quality-scores'

    jts committed Aug 15, 2012
  4. Merge branch 'master' of /nfs/users/nfs_j/js18/work/git_repository/sga

    Cornelis Arnout Albers committed Aug 15, 2012
  5. fixing alignment bug

    Cornelis Arnout Albers committed Aug 15, 2012
Commits on Aug 14, 2012
  1. Fixed inf bug in genotyping

    Cornelis Arnout Albers committed Aug 14, 2012
  2. Updated examples to use ropebwt

    jts committed Aug 14, 2012
  3. Updated sga-index help text

    jts committed Aug 14, 2012
  4. v0.9.31

    jts committed Aug 14, 2012
  5. Merge branch 'ropebwt'

    jts committed Aug 14, 2012
Commits on Aug 13, 2012
  1. BWT writing now function in ropebwt

    jts committed Aug 13, 2012
  2. Genotyping in multisample caller seems to work.

    Cornelis Arnout Albers committed Aug 13, 2012
  3. Added genotyping.

    Cornelis Arnout Albers committed Aug 13, 2012
  4. Integrating Heng Li's ropebwt code

    jts committed Aug 13, 2012
  5. Merge pull request #22 from nathanhaigh/master

    jts committed Aug 13, 2012
    Minor STDOUT updates
  6. Merge remote-tracking branch 'upstream/master'

    Nathan S. Watson-Haigh committed Aug 13, 2012
  7. Additional info (algorithm used) sent to STDOUT when using SAIS - thi…

    Nathan S. Watson-Haigh committed Aug 13, 2012
    …s is to be consistent with the output when BCR is used.
  8. Send info about which file is being processed to STDOUT.

    Nathan S. Watson-Haigh committed Aug 13, 2012
Commits on Aug 9, 2012
Commits on Aug 8, 2012
Commits on Aug 7, 2012
  1. Fixed GCC 4.6 warnings

    jts committed Aug 7, 2012
  2. Merge pull request #20 from nathanhaigh/master

    jts committed Aug 7, 2012
    merge pull request 20