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Commits on Aug 20, 2012
  1. v0.9.32

    authored
Commits on Aug 16, 2012
Commits on Aug 15, 2012
  1. Removed print

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  2. Fixed DindelHaplotype::extractVariants() incorrect assertion

    Cornelis Arnout Albers authored
  3. Merge branch 'quality-scores'

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  4. Merge branch 'master' of /nfs/users/nfs_j/js18/work/git_repository/sga

    Cornelis Arnout Albers authored
  5. fixing alignment bug

    Cornelis Arnout Albers authored
Commits on Aug 14, 2012
  1. Fixed inf bug in genotyping

    Cornelis Arnout Albers authored
  2. Updated examples to use ropebwt

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  3. Updated sga-index help text

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  4. v0.9.31

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  5. Merge branch 'ropebwt'

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Commits on Aug 13, 2012
  1. Genotyping in multisample caller seems to work.

    Cornelis Arnout Albers authored
  2. Added genotyping.

    Cornelis Arnout Albers authored
  3. Integrating Heng Li's ropebwt code

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  4. Merge pull request #22 from nathanhaigh/master

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    Minor STDOUT updates
  5. Merge remote-tracking branch 'upstream/master'

    Nathan S. Watson-Haigh authored
  6. Additional info (algorithm used) sent to STDOUT when using SAIS - thi…

    Nathan S. Watson-Haigh authored
    …s is to be consistent with the output when BCR is used.
  7. Send info about which file is being processed to STDOUT.

    Nathan S. Watson-Haigh authored
Commits on Aug 9, 2012
Commits on Aug 8, 2012
Commits on Aug 7, 2012
  1. Fixed GCC 4.6 warnings

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  2. Merge pull request #20 from nathanhaigh/master

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    merge pull request 20
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